<p>Quantitative understanding of the sources and sinks of greenhouse gases is essential for predicting greenhouse gas-climate feedback processes and their impacts on climate variability and change. Australia plays a significant role in driving variability in global carbon cycling, but the budgets of carbon gases in Australia remain highly uncertain. Here, shipborne Fourier Transform Infrared Spectrometer measurements collected around Australia are used together with a global chemical transport model (GEOS-Chem) to identify and quantify the sources of three direct and indirect carbon greenhouse gases: carbon dioxide (CO<sub>2</sub>), methane (CH<sub>4</sub>) and carbon monoxide (CO). Using these measurements, we provide an updated distribution of these gases and their sources and sinks. We find that for all three gases, the east Australian coast is largely influenced by local anthropogenic sources, which can be transported as far as 400 km off the coast. The south and west coasts are characterised by a mixture of anthropogenic sources and biomass burning. Tropical northern regions are dominated by biomass burning emissions, with significant contribution from fossil fuel for CO<sub>2</sub> and wetlands for CH<sub>4</sub>. Averaged across Australia, fossil fuels followed by biomass burning contribute the most to total CO<sub>2</sub> and to both its background value and short-term enhancements. Wetlands provide the largest background CH<sub>4</sub> source, followed by livestock, oil, gas and waste emissions, with short-term enhancements mainly driven by anthropogenic sources. For CO, secondary production from oxidation of CH<sub>4</sub> and non-methane volatile organic compounds contributes most to the background and total CO burdens, while enhancements are driven by biomass burning and anthropogenic sources. Clean air characteristic of the tropospheric background was observed away from the coast in the Indian Ocean, Coral Sea, and Tasman Sea. From the measurements in the Indian Ocean, we found that the background values of all three gases increase towards the tropics with latitudinal gradients of 0.019 ± 0.003 ppm deg<sup>−1</sup> for CO<sub>2</sub>, 0.34 ± 0.02 ppb deg<sup>−1</sup> for CH<sub>4</sub> and 0.82 ± 0.05 ppb deg<sup>−1</sup> for CO. Comparing coincident and co-located enhancements in the three carbon gases highlighted several common sources from the Australian continent. We found evidence for 17 events with similar enhancement patterns indicative of co-emission and calculated enhancements ratios and modelled source contributions for each event. We found that anthropogenic co-enhancement events are common along the east coast, while co-enhancement events in the tropics primarily derive from biomass burning sources. Few co-enhancement events were observed along the south and west coasts. While the GEOS-Chem model generally reproduced the timing of co-enhancement events, it was less able to reproduce the magnitude of enhancements. We found model overestimates of CH<sub>4</sub> from coal burning and underestimates of all three gases from biomass burning with overestimates for CO during some events. We identified missing sources from fossil fuel, biofuel, oil, gas, coal, livestock, biomass burning and the biosphere in the model, pointing to the need to further develop and evaluate greenhouse gas emission inventories for the Australian continent.</p>