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<article language="en">
	<journal>
		<journal_title>Atmospheric Chemistry and Physics Discussions</journal_title>
		<journal_url>www.atmos-chem-phys-discuss.net</journal_url>
		<issn>1680-7367</issn>
		<eissn>1680-7375</eissn>
		<volume_number>9</volume_number>
		<issue_number>2</issue_number>
		<publication_year>2009</publication_year>
	</journal>
	<doi>10.5194/acpd-9-9823-2009</doi>
	<article_url>http://www.atmos-chem-phys-discuss.net/9/9823/2009/</article_url>
	<abstract_html>http://www.atmos-chem-phys-discuss.net/9/9823/2009/acpd-9-9823-2009.html</abstract_html>
	<fulltext_pdf>http://www.atmos-chem-phys-discuss.net/9/9823/2009/acpd-9-9823-2009.pdf</fulltext_pdf>
	<start_page>9823</start_page>
	<end_page>9877</end_page>
	<publication_date>2009-04-17</publication_date>
	<article_title content_type="html">Measurements of OH and HO&lt;sub&gt;2&lt;/sub&gt; concentrations during the MCMA-2006 field campaign â€“ Part 2: Model comparison and radical budget</article_title>
	<authors>
		<author numeration="1" affiliations="1">
			<name>S. Dusanter</name>
			<email>sdusante@indiana.edu</email>
		</author>
		<author numeration="2" affiliations="1,14">
			<name>D. Vimal</name>
		</author>
		<author numeration="3" affiliations="1">
			<name>P. S. Stevens</name>
		</author>
		<author numeration="4" affiliations="2">
			<name>R. Volkamer</name>
		</author>
		<author numeration="5" affiliations="3,4">
			<name>L. T. Molina</name>
		</author>
		<author numeration="6" affiliations="5">
			<name>A. Baker</name>
		</author>
		<author numeration="7" affiliations="5">
			<name>S. Meinardi</name>
		</author>
		<author numeration="8" affiliations="5">
			<name>D. R. Blake</name>
		</author>
		<author numeration="9" affiliations="3,4">
			<name>P. Sheehy</name>
		</author>
		<author numeration="10" affiliations="6,15">
			<name>A. Merten</name>
		</author>
		<author numeration="11" affiliations="7">
			<name>R. Zhang</name>
		</author>
		<author numeration="12" affiliations="7">
			<name>J. Zheng</name>
		</author>
		<author numeration="13" affiliations="8,16">
			<name>E. C. Fortner</name>
		</author>
		<author numeration="14" affiliations="9">
			<name>W. Junkermann</name>
		</author>
		<author numeration="15" affiliations="10">
			<name>M. K. Dubey</name>
		</author>
		<author numeration="16" affiliations="10">
			<name>T. Rahn</name>
		</author>
		<author numeration="17" affiliations="11">
			<name>W. E. Eichinger</name>
		</author>
		<author numeration="18" affiliations="11">
			<name>P. Lewandowski</name>
		</author>
		<author numeration="19" affiliations="12">
			<name>J. Prueger</name>
		</author>
		<author numeration="20" affiliations="13">
			<name>H. Holder</name>
		</author>
	</authors>
	<affiliations>
		<affiliation numeration="1" content_type="html">Center for Research in Environmental Science, School of Public and Environmental Affairs, and Department of Chemistry, Indiana University, Bloomington, IN 47405, USA</affiliation>
		<affiliation numeration="2" content_type="html">Department of Chemistry and Biochemistry, University of Colorado, USA</affiliation>
		<affiliation numeration="3" content_type="html">Molina Center for Energy and the Environment, USA</affiliation>
		<affiliation numeration="4" content_type="html">Department of Earth, Atmospheric, and Planetary Sciences, Massachusetts Institute of Technology, USA</affiliation>
		<affiliation numeration="5" content_type="html">University of California, Irvine, 92697 CA, USA</affiliation>
		<affiliation numeration="6" content_type="html">Institute of Environmental Physics, University of Heidelberg, Germany</affiliation>
		<affiliation numeration="7" content_type="html">Department of Atmospheric Sciences, Texas A&amp;M University, USA</affiliation>
		<affiliation numeration="8" content_type="html">Department of Chemistry, Montana State University, USA</affiliation>
		<affiliation numeration="9" content_type="html">Forschungszentrum Karlsruhe, Institute of Meteorology and Climate Research, IMK-IFU, Garmisch-Partenkirchen, Germany</affiliation>
		<affiliation numeration="10" content_type="html">Earth and Environmental Sciences Division, Los Alamos National Laboratory, USA</affiliation>
		<affiliation numeration="11" content_type="html">IIHR-Hydroscience &amp; Engineering, University of Iowa, Iowa City, IA, USA</affiliation>
		<affiliation numeration="12" content_type="html">National Soil Tilth Lab, Ames, IA, USA</affiliation>
		<affiliation numeration="13" content_type="html">Duke University, Rayleigh, NC, USA</affiliation>
		<affiliation numeration="14" content_type="html">now at: SRI International, Menlo Park, CA, USA</affiliation>
		<affiliation numeration="15" content_type="html">now at: Institute of Applied Photophysics, Dresden University of Technology, Germany</affiliation>
		<affiliation numeration="16" content_type="html">now at: Aerodyne Research Incorporated, 45 Manning Road, Billerica, MA, USA</affiliation>
	</affiliations>
	<abstract content_type="html">Measurements of hydroxyl (OH) and hydroperoxy (HO&lt;sub&gt;2&lt;/sub&gt;) radicals were made
during the Mexico City Metropolitan Area (MCMA) field campaign as part of
the MILAGRO (Megacity Initiative: Local and Global Research Observations)
project during March 2006. These measurements provide a unique opportunity
to test current models of atmospheric RO&lt;sub&gt;x&lt;/sub&gt; (OH+HO&lt;sub&gt;2&lt;/sub&gt;+RO&lt;sub&gt;2&lt;/sub&gt;)
photochemistry under polluted conditions. A zero-dimensional box model based
on the Regional Atmospheric Chemical Mechanism (RACM) was constrained by
10-min averages of 24 &lt;i&gt;J&lt;/i&gt;-values and the concentrations of 97 chemical
species. Several issues related to the RO&lt;sub&gt;x&lt;/sub&gt; chemistry under polluted
conditions are highlighted in this study: (i) median concentrations of both
OH and HO&lt;sub&gt;2&lt;/sub&gt; were underpredicted during morning hours, suggesting a
significant source of radicals is missing from current atmospheric models
under polluted conditions, consistent with previous urban field campaigns.
(ii) The predicted HO&lt;sub&gt;2&lt;/sub&gt;/OH ratios were underestimated for NO mixing
ratios higher than 5 ppb, also consistent with previous urban field
campaigns. This suggests that under high NO&lt;sub&gt;x&lt;/sub&gt; conditions, the HO&lt;sub&gt;2&lt;/sub&gt;
to OH propagation rate may be overestimated by the model or a process
converting OH into HO&lt;sub&gt;2&lt;/sub&gt; may be missing from the chemical mechanism. On a
daily basis (08:40 a.m.â€“06:40 p.m.), an analysis of the radical budget
indicates that HONO photolysis, HCHO photolysis, O&lt;sub&gt;3&lt;/sub&gt;-alkene reactions
and dicarbonyls photolysis are the main radical sources. O&lt;sub&gt;3&lt;/sub&gt; photolysis
contributes to less than 6% of the total radical production.</abstract>
	<references>
		<reference numeration="1" content_type="text"> Baez, A. P., Padilla, H., Garcia, R., Belmont, R., and Torres, M. d. C.: Measurement of indoor-outdoor carbonyls at four residential homes in Mexico City metropolitan area, Int. J. Environ. Pollut., 26, 90â€“105, 2006. </reference>
		<reference numeration="2" content_type="text"> Bloss, C., Wagner, V., Bonzanini, A., Jenkin, M. E., Wirtz, K., Martin-Reviejo, M., and Pilling, M. J.: Evaluation of detailed aromatic mechanisms (MCMv3 and MCMv3.1) against environmental chamber data, Atmos. Chem. Phys., 5, 623â€“639, 2005a. </reference>
		<reference numeration="3" content_type="text"> Bloss, C., Wagner, V., Jenkin, M. E., Volkamer, R., Bloss, W. J., Lee, J. D., Heard, D. E., Wirtz, K., Martin-Reviejo, M., Rea, G., Wenger, J. C., and Pilling, M. J.: Development of a detailed chemical mechanism (MCMv3.1) for the atmospheric oxidation of aromatic hydrocarbons, Atmos. Chem. Phys., 5, 641â€“664, 2005b. </reference>
		<reference numeration="4" content_type="text"> Colman, J. J., Swanson, A. L., Meinardi, S., Barkley, C. S., Blake, D. R., and Sherwood, R.: Description of the Analysis of a Wide Range of Volatile Organic Compounds in Whole Air Samples Collected during PEM-Tropics A and B, Anal. Chem., 73, 3723â€“3731, 2001. </reference>
		<reference numeration="5" content_type="text"> de Foy, B., Varela, J. R., Molina, L. T., and Molina, M. J.: Rapid ventilation of the Mexico City basin and regional fate of the urban plume, Atmos. Chem. Phys., 6, 2321â€“2335, 2006. </reference>
		<reference numeration="6" content_type="text"> Dunlea, E. J., Herndon, S. C., Nelson, D. D., Volkamer, R. M., Lamb, B. K., Allwine, E. J., Grutter, M., Ramos Villegas, C. R., Marquez, C., Blanco, S., Cardenas, B., Kolb, C. E., Molina, L. T., and Molina, M. J.: Technical note: Evaluation of standard ultraviolet absorption ozone monitors in a polluted urban environment, Atmos. Chem. Phys., 6, 3163â€“3180, 2006. </reference>
		<reference numeration="7" content_type="text"> Dunlea, E. J., Herndon, S. C., Nelson, D. D., Volkamer, R. M., San Martini, F., Sheehy, P. M., Zahniser, M. S., Shorter, J. H., Wormhoudt, J. C., Lamb, B. K., Allwine, E. J., Gaffney, J. S., Marley, N. A., Grutter, M., Marquez, C., Blanco, S., Cardenas, B., Retama, A., Ramos Villegas, C. R., Kolb, C. E., Molina, L. T., and Molina, M. J.: Evaluation of nitrogen dioxide chemiluminescence monitors in a polluted urban environment, Atmos. Chem. Phys., 7, 2691â€“2704, 2007. </reference>
		<reference numeration="8" content_type="text"> Dusanter, S., Vimal, D., and Stevens, P. S.: Technical note: Measuring tropospheric OH and HO&lt;sub&gt;2&lt;/sub&gt; by laser-induced fluorescence at low pressure. A comparison of calibration techniques, Atmos. Chem. Phys., 8, 321â€“340, 2008a. </reference>
		<reference numeration="9" content_type="text"> Dusanter, S., Vimal, D., Stevens, P. S., Volkamer, R., and Molina, L. T.: Measurements of OH and HO2 concentrations during the MCMA-2006 field campaign â€“ Part~1: Deployment of the Indiana University laser-induced fluorescence instrument, Atmos. Chem. Phys., 9, 1665â€“1685, 2009. </reference>
		<reference numeration="10" content_type="text"> Elshorbany, Y. F., Kurtenbach, R., Wiesen, P., Lissi, E., Rubio, M., Villena, G., Gramsch, E., Rickard, A. R., Pilling, M. J., and Kleffmann, J.: Oxidation capacity of the city air of Santiago, Chile, Atmos. Chem. Phys. Discuss., 8, 19123â€“19171, 2008. </reference>
		<reference numeration="11" content_type="text"> Emmerson, K. M., Carslaw, N., Carpenter, L. J., Heard, D. E., Lee, J. D., and Pilling, M. J.: Urban atmospheric chemistry during the PUMA campaign 1: Comparison of modelled OH and HO&lt;sub&gt;2&lt;/sub&gt; concentrations with measurements, J. Atmos. Chem., 52, 143â€“164, 2005a. </reference>
		<reference numeration="12" content_type="text"> Emmerson, K. M., Carslaw, N., and Pilling, M. J.: Urban atmospheric chemistry during the PUMA campaign 2: Radical budgets for OH, HO&lt;sub&gt;2&lt;/sub&gt; and RO&lt;sub&gt;2&lt;/sub&gt;, J. Atmos. Chem., 52, 165â€“183, 2005b. </reference>
		<reference numeration="13" content_type="text"> Emmerson, K. M., Carslaw, N., Carslaw, D. C., Lee, J. D., McFiggans, G., Bloss, W. J., Gravestock, T., Heard, D. E., Hopkins, J., Ingham, T., Pilling, M. J., Smith, S. C., Jacob, M., and Monks, P. S.: Free radical modelling studies during the UK TORCH Campaign in Summer 2003, Atmos. Chem. Phys., 7, 167â€“181, 2007. </reference>
		<reference numeration="14" content_type="text"> Fortner, E. C., Zheng, J., Zhang, R., Berk Knighton, W., Volkamer, R. M., Sheehy, P., Molina, L., and AndrÃ©, M.: Measurements of Volatile Organic Compounds Using Proton Transfer Reaction – Mass Spectrometry during the MILAGRO 2006 Campaign, Atmos. Chem. Phys., 9, 467â€“481, 2009. </reference>
		<reference numeration="15" content_type="text"> George, L. A., Hard, T. M., and O&apos;Brien, R. J.: Measurement of free radicals OH and HO&lt;sub&gt;2&lt;/sub&gt; in Los Angeles smog, J. Geophys. Res., 104, 11643â€“11655, 1999. </reference>
		<reference numeration="16" content_type="text"> Heard, D. E. and Pilling, M. J.: Measurement of OH and HO&lt;sub&gt;2&lt;/sub&gt; in the troposphere, Chem. Rev., 103, 5163â€“5198, 2003. </reference>
		<reference numeration="17" content_type="text"> Holland, F., Hofzumahaus, A., SchÃ¤fer, J., Kraus, A., and PÃ¤tz, H.-W.: Measurements of OH and HO&lt;sub&gt;2&lt;/sub&gt; radical concentrations and photolysis frequencies during BERLIOZ, J. Geophys. Res., 108, D21312, 8246â€“8267, 2003. </reference>
		<reference numeration="18" content_type="text"> Jenkin, M. E., Saunders, S. M., and Pilling, M. J.: The tropospheric degradation of volatile organic compounds: A protocol for mechanism development, Atmos. Env., 31, 81â€“104, 1997. </reference>
		<reference numeration="19" content_type="text"> Junkermann, W. and Burger, J. M.: A New Portable Instrument for Continuous Measurement of Formaldehyde in Ambient Air, J. Atmos. Ocean. Tech., 23, 38â€“45, 2006. </reference>
		<reference numeration="20" content_type="text"> Kanaya, Y., Cao, R., Akimoto, H., Fukuda, M., Komazaki, Y., Yokouchi, Y., Koike, M., Tanimoto, H., Takegaya, N., and Kondo, Y.: Urban photochemistry in central Tokyo: 1. Observed and modeled OH and HO&lt;sub&gt;2&lt;/sub&gt; radical concentrations during the winter and summer 2004, J. Geophys. Res., 112, D21312, doi:10.1029/2007JD008670, 2007. </reference>
		<reference numeration="21" content_type="text"> Kleffmann, J.: Daytime Sources of Nitrous Acid (HONO) in the Atmospheric Boundary Layer, Chem. Phys. Chem., 8, 1137â€“1144, 2007. </reference>
		<reference numeration="22" content_type="text"> Lewis, A. C., Carslaw, D. C., Marriott, P. J., Kinghorn, R. M., Morrison, P., Lee, A. L., Bartle, K. D., and Pilling, M. J.: Alarger pool of ozone-forming carbon compounds in urban atmospheres, Nature, 405, 778â€“781, 2000. </reference>
		<reference numeration="23" content_type="text"> Li, S., Matthews, J., and Sinha, A.: Atmospheric Hydroxyl Radical Production from Electronically Excited NO&lt;sub&gt;2&lt;/sub&gt; and H&lt;sub&gt;2&lt;/sub&gt;O, Science, 319, 1657â€“1660, 2008. </reference>
		<reference numeration="24" content_type="text"> Madronich, S.: Photodissociation in the atmosphere 1. Actinic flux and the effect of ground reflections and clouds, J. Geophys. Res., 92, 9740â€“9752, 1989. </reference>
		<reference numeration="25" content_type="text"> Madronich, S. and Weller, G.: Numerical integration errors in calculated tropospheric photodissociation rate coefficients, J. Atmos. Chem., 10, 289â€“300, 1990. </reference>
		<reference numeration="26" content_type="text"> Mao, J., Ren, X., Chen, S., Brune, W. H., Chen, Z., Martinez, M., Harder, H., Lefer, B., Rappengluck, B., Flynn, J., and Leuchner, M.: Atmospheric Oxidation Capacity in the Summer of Houston 2006: Comparison with Summer Measurements in Other Metropolitan Studies, Atmos. Environ., doi:10.1016/j.atmosenv.2009.1001.1013, in press, 2009. </reference>
		<reference numeration="27" content_type="text"> Martinez, M., Harder, H., Kovacs, T. A., Simpas, J. B., Bassis, J., Lesher, R., Brune, W. H., Frost, G. J., Williams, E. J., Stroud, C. A., Jobson, B. T., Roberts, J. M., Hall, S. R., Shetter, R. E., Wert, B., Fried, A., Alicke, B., Stutz, J., Young, V. L., White, A. B., and Zamora, R. J.: OH and HO&lt;sub&gt;2&lt;/sub&gt; concentrations, sources, and loss rates during the Southern Oxidants Study in Nashville, Tennesse, summer 1999, J. Geophys. Res., 108, 4617, doi:10.1029/2003JD003551, 2003. </reference>
		<reference numeration="28" content_type="text"> Merten, A.: New design of Longpath-DOAS instruments based on fibre optics and applications in the study of the urban atmosphere, Thesis, Heidelberg, Univ., 2008. </reference>
		<reference numeration="29" content_type="text"> Monks, P. S., Rickard, A. R., and Stacey, L. H.: Attenuation of spectral actinic flux and photolysis frequencies at the surface through homogenous cloud fields, J. Geophys. Res., 109, D17206, doi: 10.1029/2003JD004076, 2004. </reference>
		<reference numeration="30" content_type="text"> Platt, U., Alicke, B., Dubois, R., Geyer, A., Hofzumahaus, A., Holland, F., Martinez, M., Mihelcic, D., Klupfel, T., Lohrmann, B., Patz, W., Perner, D., Rohrer, F., Schafer, J., and Stutz, J.: Free radicals and fast photochemistry during BERLIOZ, J. Atmos. Chem., 42, 359â€“394, 2002. </reference>
		<reference numeration="31" content_type="text"> Ren, X., Harder, H., Martinez, M., Lesher, R. L., Oliger, A., Simpas, J. B., Brune, W. H., Schwab, J. J., Demerjian, K. L., He, Y., Zhou, X., and Gao, H.: OH and HO&lt;sub&gt;2&lt;/sub&gt; Chemistry in the urban atmosphere of New York City, Atmos. Environ., 37, 3639â€“3651, 2003. </reference>
		<reference numeration="32" content_type="text"> Sander, S. P., Friedl, R. R., Golden, D. M., Kurylo, M. J., Moortgat, G. K., Wine, P. H., Ravishankara, A. R., Kolb, C. E., Molina, M. J., Finlayson-Pitts, B. J., Huie, R. E., and Orkin, V. L.: Chemical kinetics and photochemical data for use in atmospheric studies, Evaluation number 15, JPL Publication 06-2, NASA Jet Propulsion Laboratory, Pasadena, California, USA, 2006. </reference>
		<reference numeration="33" content_type="text"> Saunders, S. M., Jenkin, M. E., Derwent, R. G., and Pilling, M. J.: Protocol for the development of the Master Chemical Mechanism, MCM~v3 (Part~A): tropospheric degradation of non-aromatic volatile organic compounds, Atmos. Chem. Phys., 3, 161â€“180, 2003. </reference>
		<reference numeration="34" content_type="text"> Volkamer, R., Sheehy, P. M., Molina, L. T., and Molina, M. J.: Oxidative capacity of the Mexico City atmosphere – Part 1: A radical source perspective, Atmos. Chem. Phys. Discuss., 7, 5365â€“5412, 2007. </reference>
		<reference numeration="35" content_type="text"> Shirley, T. R., Brune, W. H., Ren, X., Mao, J., Lesher, R., Cardenas, B., Volkamer, R., Molina, L. T., Molina, M. J., Lamb, B., Velasco, E., Jobson, T., and Alexander, M.: Atmospheric oxidation in the Mexico City Metropolitan Area (MCMA) during April 2003, Atmos. Chem. Phys., 6, 2753â€“2765, 2006. </reference>
		<reference numeration="36" content_type="text"> Sillman, S.: Tropospheric ozone: The debate over control strategies, Annu. Rev. Energ. En., 18, 31â€“56, 1993. </reference>
		<reference numeration="37" content_type="text"> Stockwell, W. R., Kirchner, F., and Kuhn, M.: A new mechanism for regional atmospheric chemistry modeling, J. Geophys. Res., 102, 25847â€“25879, 1997. </reference>
		<reference numeration="38" content_type="text"> Velasco, E., Lamb, B., Westberg, H., Allwine, E., Sosa, G., Arriaga-Colina, J. L., Jobson, B. T., Alexander, M. L., Prazeller, P., Knighton, W. B., Rogers, T. M., Grutter, M., Herndon, S. C., Kolb, C. E., Zavala, M., de Foy, B., Volkamer, R., Molina, L. T., and Molina, M. J.: Distribution, magnitudes, reactivities, ratios and diurnal patterns of volatile organic compounds in the Valley of Mexico during the MCMA 2002 &amp; 2003 field campaigns, Atmos. Chem. Phys., 7, 329â€“353, 2007. </reference>
		<reference numeration="39" content_type="text"> Volkamer, R., Martini, F. S., Molina, L. T., Salcedo, D., Jiminez, J. L., and Molina, M. J.: A missing sink for gas-phase glyoxal in Mexico City: Formation of secondary organic aerosol, Geophys. Res. Lett., 34, L19807, doi:10.1029/2007GL030752, 2007a. </reference>
		<reference numeration="40" content_type="text"> Volkamer, R., Sheehy, P. M., Molina, L. T., and Molina, M. J.: Oxidative capacity of the Mexico City atmosphere â€“ Part 1: A radical source perspective, Atmos. Chem. Phys. Discuss., 7, 5365â€“5412, 2007b. </reference>
		<reference numeration="41" content_type="text"> Volkamer, R., Ziemann, P. J., and Molina, M. J.: Secondary Organic Aerosol Formation from Acetylene (C2H2): seed effect on SOA yields due to organic photochemistry in the aerosol aqueous phase, Atmos. Chem. Phys., 9, 1907â€“1928, 2009. </reference>
		<reference numeration="42" content_type="text"> Wennberg, P. O. and Dabdub, D.: Rethinking Ozone Production, Science, 319, 1624â€“1625, 2008. </reference>
		<reference numeration="43" content_type="text"> Zheng, J., Zhang, R., Fortner, E. C., Volkamer, R. M., Molina, L., Aiken, A. C., Jimenez, J. L., Gaeggeler, K., Dommen, J., Dusanter, S., Stevens, P. S., and Tie, X.: Measurements of HNO&lt;sub&gt;3&lt;/sub&gt; and N&lt;sub&gt;2&lt;/sub&gt;O$_5$ using ion drift-chemical ionization mass spectrometry during the MILAGRO/MCMA-2006 campaign, Atmos. Chem. Phys., 8, 6823â€“6838, 2008. </reference>
	</references>
</article>

