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<front>
<journal-meta>
<journal-id journal-id-type="publisher">ACPD</journal-id>
<journal-title-group>
<journal-title>Atmospheric Chemistry and Physics Discussions</journal-title>
<abbrev-journal-title abbrev-type="publisher">ACPD</abbrev-journal-title>
</journal-title-group>
<issn pub-type="epub">1680-7375</issn>
<publisher><publisher-name>Copernicus GmbH</publisher-name>
<publisher-loc>Göttingen, Germany</publisher-loc>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.5194/acpd-9-16267-2009</article-id>
<title-group>
<article-title>Constraining the concentration of the hydroxyl radical in a stratocumulus-topped marine boundary layer from sea-to-air eddy covariance flux measurements of dimethylsulfide</article-title>
</title-group>
<contrib-group><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Yang</surname>
<given-names>M.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Blomquist</surname>
<given-names>B. W.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Huebert</surname>
<given-names>B. J.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
</contrib>
</contrib-group><aff id="aff1">
<label>1</label>
<addr-line>Department of Oceanography, University of Hawaii, Honolulu, HI, USA</addr-line>
</aff>
<pub-date pub-type="epub">
<day>30</day>
<month>07</month>
<year>2009</year>
</pub-date>
<volume>9</volume>
<issue>4</issue>
<fpage>16267</fpage>
<lpage>16294</lpage>
<permissions>
<license xlink:type="simple">
<license-p>This is an open-access article ditributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.</license-p>
</license>
</permissions>
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<abstract>
<p>The hydroxyl radical (OH) is an important oxidant in the troposphere due to
its high reactivity and relative abundance. Measuring the concentration of
OH in situ, however, is technically challenging. Here we present a robust
yet simple method of estimating an OH-equivalent oxidant concentration
(&quot;effective OH&quot;) in the marine boundary layer (MBL) from the mass balance
of dimethylsulfide (DMS). We use shipboard eddy covariance measurements of
the sea-to-air DMS flux from the Vamos Ocean-Cloud-Atmosphere-Land Study
Regional Experiment (VOCALS-REx) in October and November of 2008. The
persistent stratocumulus cloud-cover off the west coast of South America and
the associated strong inversion between MBL and the free troposphere (FT)
greatly simplify the dynamics in this region and make our budget estimate
possible. From the observed diurnal cycle in DMS concentration, the
nighttime entrainment velocity at the inversion is estimated to be 4 mm s&lt;sup&gt;&amp;minus;1&lt;/sup&gt;. We calculate 1.4&amp;times;10&lt;sup&gt;6&lt;/sup&gt; OH molecules cm&lt;sup&gt;&amp;minus;3&lt;/sup&gt;
from the DMS
budget, which represents a ~monthly effective OH concentration and is
well within the range of previous estimates. Furthermore, when fitted to the
measured intensity of solar flux, the resultant diel variation in OH
concentration, together with the DMS surface and entrainment fluxes, enables
us to accurately replicate the observed diurnal cycle in DMS (correlation
coefficient exceeding 0.9). The nitrate radical is found to have little
contribution to DMS oxidation during VOCALS-REx.</p>
</abstract>
<counts><page-count count="28"/></counts>
</article-meta>
</front>
<body/>
<back>
<ref-list>
<title>References</title>
<ref id="ref1">
<label>1</label><mixed-citation publication-type="other" xlink:type="simple">Bandy, A. R., Thornton, D. C., Blomquist, B. W., Chen, S., Wade, T. P., Ianni, J. C., Mitchell, G. M., and Nadler, W.: Chemistry of dimethylsulfide in the equatorial Pacific atmosphere, Geophys. Res. Lett., 23(7), 741–744, 1996. </mixed-citation>
</ref>
<ref id="ref2">
<label>2</label><mixed-citation publication-type="other" xlink:type="simple">Bandy, A. R., Thornton, D. C., Tu, F. H., Blomquist, B. W., Nadler, W., Mitchell, G. M., and Lenchow, D. H.: Determination of the vertical flux of dimethylsulfide by eddy correlation and atmospheric pressure ionization mass spectrometry (APIMS), J. Geophys. Res., 107(D24), 4743, doi:10.1029/2002JD002472, 2002. </mixed-citation>
</ref>
<ref id="ref3">
<label>3</label><mixed-citation publication-type="other" xlink:type="simple">Bates, T. S., Quinn, P. K., Covert, D. S., Coffman, D. J., Johnson, J. E., and Wiedensohler, A.: Aerosol physical properties and processes in the lower marine boundary layer: A comparison of shipboard sub-micron data from ACE-1 and ACE-2, Tellus, Ser. B, 52, 258–272, 2000. </mixed-citation>
</ref>
<ref id="ref4">
<label>4</label><mixed-citation publication-type="other" xlink:type="simple">Blomquist, B., Fairall, C. W., Huebert, B., Kieber D., and Westby, G.: DMS sea-air transfer velocity: Direct measurements by eddy covariance and parameterization based on the NOAA/COARE gas transfer model, Geophys. Res. Lett., 33(7), L07601, doi:10.1029/2006GL025735, 2006. </mixed-citation>
</ref>
<ref id="ref5">
<label>5</label><mixed-citation publication-type="other" xlink:type="simple">Bretherton, C. S. and Pincus, R.: Cloudiness and marine boundary layer dynamics in the ASTEX Lagrangian experiments. Part I: Synoptic setting and vertical structure, J. Atmos. Sci., $52$, 2707–2723, 1995. </mixed-citation>
</ref>
<ref id="ref6">
<label>6</label><mixed-citation publication-type="other" xlink:type="simple">Bretherton, C. S., Uttal, T., Fairall, C. W., Yuter, S. E., Weller, R. A., Baumgardner, D., Comstock, K., Wood, R., and Rag, G. B.: The EPIC 2001 stratocumulus study, B. Am. Meteorol. Soc., 85(7), 967–977, 2004. </mixed-citation>
</ref>
<ref id="ref7">
<label>7</label><mixed-citation publication-type="other" xlink:type="simple">Caldwell, P., Bretherton, C. S., and Wood, R.: Mixed-Layer Budget Analysis of the Diurnal Cycle of Entrainment in Southeast Pacific Stratocumulus, J. Atmos. Sci., 62(10), 3775–3791, 2005. </mixed-citation>
</ref>
<ref id="ref8">
<label>8</label><mixed-citation publication-type="other" xlink:type="simple">Charlson, R. J., Lovelock, J. E., Andreae, M. O., and Warren, S. G.: Oceanic phytoplankton, atmospheric sulfur, cloud albedo and climate, Nature, 326, 655–661, 1987. </mixed-citation>
</ref>
<ref id="ref9">
<label>9</label><mixed-citation publication-type="other" xlink:type="simple">Chen, G., Davis, D. D., Kasibhatla, P., Bandy, A. R., Thornton, D. C., Huebert, B. J., Clarke, A. D., and Blomquist, B. W.: A study of DMS oxidation in the tropics: comparison of Christmas Island field observations of DMS, SO&lt;sub&gt;2&lt;/sub&gt;, and DMSO with model simulations, J. Atmos. Chem., 37, 137–160, 2000. </mixed-citation>
</ref>
<ref id="ref10">
<label>10</label><mixed-citation publication-type="other" xlink:type="simple">Davis, D., Grodzinsky, G., Chen, G., Crawford, J., Eisele, F., Mauldin, L., Tanner, D., Cantrell, C., Brune, W., Tan, D., Faloona, I., Ridley, B., Montzka, D., Walega, J., Grahek, F., Sandholm, S., Sachse, G., Vay, S., Anderson, B., Avery, M., Heikes, B., Snow, J., O&apos;Sullivan, D., Shetter, R., Lefer, B., Blake, D., Blake, N., Carroll, M., and Wang, Y.: Marine latitude/altitude OH distributions: Comparison of Pacific Ocean observations with models, J. Geophys. Res.-Atmos., 106, 32691–32707, 2001. </mixed-citation>
</ref>
<ref id="ref11">
<label>11</label><mixed-citation publication-type="other" xlink:type="simple">Davis, D., Chen, G., Bandy, A., Thornton, D., Eisele, F., Mauldin, L. Tanner, D. Lenschow, D., Fuelberg, H., Huebert, B., Heath, J., Clarke, A., and Blake, D.: Dimethylsulfide oxidation in the equatorial Pacific: comparison of model simulations with field observations for DMS, SO&lt;sub&gt;2&lt;/sub&gt;, H&lt;sub&gt;2&lt;/sub&gt;SO&lt;sub&gt;4&lt;/sub&gt;(g), MSA(g), MS, and NSS, J. Geophys. Res., 104(D5), 5765–5784, 1999. </mixed-citation>
</ref>
<ref id="ref12">
<label>12</label><mixed-citation publication-type="other" xlink:type="simple">Donahue, N. and Prinn, R.: Nonmethane hydrocarbon chemistry in the remote marine boundary layer, J. Geophys. Res., 95, 18387–18411, 1990. </mixed-citation>
</ref>
<ref id="ref13">
<label>13</label><mixed-citation publication-type="other" xlink:type="simple">Edson, J. B., Hinton, A. A., Prada, K. E., Hare, J. E., and Fairall, C. W.: Direct covariance flux estimates from mobile platforms at sea, J. Atmos. Oceanic Technol., 15, 547–562, 1998. </mixed-citation>
</ref>
<ref id="ref14">
<label>14</label><mixed-citation publication-type="other" xlink:type="simple">Eisele, F. L. and Tanner, D. J.: Ion assisted tropospheric OH measurement, J. Geophys. Res., 96, 9295–9308, 1991. </mixed-citation>
</ref>
<ref id="ref15">
<label>15</label><mixed-citation publication-type="other" xlink:type="simple">Faloona, I., Lenschow, D., Campos, T., Stevens, B., van Zanten, M., Blomquist, B., Thornton, D., Bandy, A., and Gerber, H.: Observations of Entrainment in Eastern Pacific Marine Stratocumulus Using Three Conserved Scalars, J. Atmos. Sci., 62, 3268–3285, 2005. </mixed-citation>
</ref>
<ref id="ref16">
<label>16</label><mixed-citation publication-type="other" xlink:type="simple">Hard, T. M., O&apos;Brien, R.J., Chan, C. Y., and Mehrabzadeh, A. A.: Tropospheric free radical determination by FAGE, Environ. Sci. Technol., 18, 768–777, 1984. </mixed-citation>
</ref>
<ref id="ref17">
<label>17</label><mixed-citation publication-type="other" xlink:type="simple">Hofzumahaus, A., Aschmutat, U., Brandenburger, U, Brauers, T., Dorn, H.-P., Hausmann, M., Heßling, M., Holland, F., Plass-Dülmer, C., and Ehhalt, D. H.: Intercomparison of tropospheric OH measurements by different laser techniques during the POPCORN campaign 1994, J. Atmos. Chem., 31, 227–246, 1998. </mixed-citation>
</ref>
<ref id="ref18">
<label>18</label><mixed-citation publication-type="other" xlink:type="simple">Holland, F., Aschmutat, U., Heßling, M., Hofzumahaus, A., and Ehhalt, D. H.: Highly time resolved measurements of OH during POPCORN using laser-induced fluorescence spectroscopy, J. Atmos. Chem., 31, 205–225, 1998. </mixed-citation>
</ref>
<ref id="ref19">
<label>19</label><mixed-citation publication-type="other" xlink:type="simple">Huebert, B. J., Blomquist, B. W., Hare, J. E., Fairall, C. W., Johnson, J. E., and Bates, T. S.: Measurement of the sea-air DMS flux and transfer velocity using eddy correlation, Geophys. Res. Lett., 31, L23113, doi:10.1029/2004GL021567, 2004. </mixed-citation>
</ref>
<ref id="ref20">
<label>20</label><mixed-citation publication-type="other" xlink:type="simple">Hynes, A. J., Wine, P. H., and Semmes, D. H.: Kinetics and mechanisms of OH reactions with organic sulfides, J. Phys. Chem., 90, 4148–4156, 1986. </mixed-citation>
</ref>
<ref id="ref21">
<label>21</label><mixed-citation publication-type="other" xlink:type="simple">Levy, H. I.: Normal Atmosphere: Large Radical and Formaldehyde Concentrations Predicted, Science, 173, 141–143, 1971. </mixed-citation>
</ref>
<ref id="ref22">
<label>22</label><mixed-citation publication-type="other" xlink:type="simple">Lilly, D. K.: Models of cloud-topped mixed layers under a strong inversion, Q. J. Roy. Meteor. Soc., 94, 292–309, 1968. </mixed-citation>
</ref>
<ref id="ref23">
<label>23</label><mixed-citation publication-type="other" xlink:type="simple">Lovelock, J. E., Maggs, R. J., and Rasmussen, R. A.: Atmospheric dimethyl sulphide and the natural sulphur cycle, Nature, 237(5356), 452–453, 1972. </mixed-citation>
</ref>
<ref id="ref24">
<label>24</label><mixed-citation publication-type="other" xlink:type="simple">Mauldin, R. L., Eisele, F. L., Cantrell, C. A., Kosciuch, E., Ridley, B. A., Lefer, B., Tanner, D. J., Nowak, J. B., Chen, G., Wang, L., and Davis, D.: Measurements of OH aboard the NASA P-3 during PEM-Tropics B, J. Geophys. Res., 106, 32657–32666, 2001. </mixed-citation>
</ref>
<ref id="ref25">
<label>25</label><mixed-citation publication-type="other" xlink:type="simple">Mount, G. H.: The measurement of tropospheric OH by long-path absorption, 1. Instrumentation, J. Geophys. Res., 97, 2427–2444, 1992. </mixed-citation>
</ref>
<ref id="ref26">
<label>26</label><mixed-citation publication-type="other" xlink:type="simple">Nowak, J. B., Davis, D. D., Chen, G., Eisele, F. L., Mauldin III, R. L., Tanner, D. J., Cantrell, C., Kosiuch, E., Bandy, A., Thorton, D., and Clarke, A.: Airborne observations of DMSO, DMS, and OH at marine tropical latitudes, Geophys. Res. Lett., 28(11), 2201–2204, 2001. </mixed-citation>
</ref>
<ref id="ref27">
<label>27</label><mixed-citation publication-type="other" xlink:type="simple">Platt, U. and Heintz, F.: Nitrate radicals in tropospheric chemistry, Isr. d. Chem., 34, 289–300, 1994. </mixed-citation>
</ref>
<ref id="ref28">
<label>28</label><mixed-citation publication-type="other" xlink:type="simple">Prinn, R., Cunnold, D., Simmonds, P., Alyea, F., Boldi, R., Crawford, A., Fraser, P., Gutzler, D., Hartley, D., Rosen, R., and Rasmussen, R.: Global Average Concentration and Trend for Hydroxyl Radicals Deduced From ALE/GAGE Trichloroethane (Methyl Chloroform) Data for 1978–1990, J. Geophys. Res., 97(D2), 2445–2461, 1992. </mixed-citation>
</ref>
<ref id="ref29">
<label>29</label><mixed-citation publication-type="other" xlink:type="simple">Prinn, R. G., Weiss, R. F., Miller, B. R., Huang, J., Alyea, F. N., Cunnold, D. M., Fraser, P. J., Hartley, D. E., and Simmonds, P. G.: Atmospheric trends and liftetime of CH&lt;sub&gt;3&lt;/sub&gt;CCl&lt;sub&gt;3&lt;/sub&gt; and global OH concentrations, Science, 269, 187–192, 1995. </mixed-citation>
</ref>
<ref id="ref30">
<label>30</label><mixed-citation publication-type="other" xlink:type="simple">Russell, L. M., Lenschow, D. H., Laursen, K. K., Krummel, B., Siems, S. T., Bandy, A. R. Thornton, D. C., and Bates, T. S.: Bidirectional mixing in an ACE 1 marine boundary layer overlain by a second turbulent layer, J. Geophys. Res., 103, 16411–16432, 1998. </mixed-citation>
</ref>
<ref id="ref31">
<label>31</label><mixed-citation publication-type="other" xlink:type="simple">Sander, S. P., Golden, D. M., Kurylo, M. J., Moortgat, G. K., Wine, P. H., Ravishankara, A. R., Kolb, C. E., Molina, M. J., Finlayson-Pitts, B. J., Huie, R. E., and Orkin, V. L.: Chemical Kinetics and Photochemical Data for Use in Atmospheric Studies, Evaluation Number 15, Jet Propulsion Laboratory, Pasadena, CA (available at http://jpldataeval.jpl.nasa.gov/), 2006. </mixed-citation>
</ref>
<ref id="ref32">
<label>32</label><mixed-citation publication-type="other" xlink:type="simple">Seinfeld, J. H. and Pandis, S. N.: Atmospheric chemistry and physics: from air pollution to climate change 2nd ed. Wiley-Interscience, Hoboken, New Jersey, USA, 2006. </mixed-citation>
</ref>
<ref id="ref33">
<label>33</label><mixed-citation publication-type="other" xlink:type="simple">Shon, Z. H, Davis, D., Chen, G., Grodzinsky, G., Bandy, A., Thornton, D., Sandholm, S., Bradshaw, J., Stickel, R., Kok, G., Mauldin, L., Tanner D., and Eisele, F.: Evaluation of the DMS Flux and its Conversion in SO&lt;sub&gt;2&lt;/sub&gt; Over the Southern Ocean, Atmos. Environ., 35, 159–172, 2001. </mixed-citation>
</ref>
<ref id="ref34">
<label>34</label><mixed-citation publication-type="other" xlink:type="simple">Shultz M. G., Jacob, D. J., Wang, Y., Logan, J. A., Atlas, E. L., Blake, D. R., Blake, N. J., Bradshaw, J. D., Fenn, M. A., Flocke, F., Gregory, G. L., Heikes, B. G., Sachse, G. W., Sandholm, S. T., Shetter, R. E., Singh, H. B., Talbot, R. W.: On the origin of tropospheric ozone and NO&lt;sub&gt;x&lt;/sub&gt; over the tropical South Pacific, J. Geophys. Res., 104, 5829–5843, 1999. </mixed-citation>
</ref>
<ref id="ref35">
<label>35</label><mixed-citation publication-type="other" xlink:type="simple">Spivakowsky, C. M., Logan, A. J., Montzka, S. A., Balkanski, Y. J., Foreman-Fowler, M., Jones, D. B. A., Horowitz, L. W., Fusco, A. C., Brenninkmeijer, C. A. M., Prather, M. J., Wofsy, S. C., and McElroy, M. B.: Three dimensional climatological distribution of tropospheric OH: Update and evaluation, J. Geophys. Res., 105, 8931–8980, 2000. </mixed-citation>
</ref>
<ref id="ref36">
<label>36</label><mixed-citation publication-type="other" xlink:type="simple">Stevens, B., Lenschow, D. H., Vali, G., Gerber, H., Bandy, A., Blomquist, B., Brenguier, J. L., Bretherton, C. S., Burnet, F., Campos, T., Chai, S., Faloona, I., Friesen, D., Haimov, S., Laursen, K., Lilly, D. K., Loehrer, S. M., Malinowski, S. P., Morley, B., Petters, M. D., Rogers, D. C., Russell, L., Savic-Jovcic, V., Snider, J. R., Straub, D., Szumowski, M. J., Takagi, H., Thornton, D. C., Tschudi, M., Twohy, C., Wetzel, M., and van Zanten, M. C.: Dynamics and Chemistry of Marine Stratocumulus – DYCOMS-II, 2003: B. Am. Meteorol. Soc., 84, 579–593, 2003. </mixed-citation>
</ref>
<ref id="ref37">
<label>37</label><mixed-citation publication-type="other" xlink:type="simple">Stickel R. E., Zhao, Z., and Wine, P. H.: Branching ratios for hydrogen transfer in the reactions of OD radicals with CH&lt;sub&gt;3&lt;/sub&gt;SCH&lt;sub&gt;3&lt;/sub&gt; and CH&lt;sub&gt;3&lt;/sub&gt;SC&lt;sub&gt;2&lt;/sub&gt;H$_5$, Chem. Phys. Lett., 212, 312–318, 1993. </mixed-citation>
</ref>
<ref id="ref38">
<label>38</label><mixed-citation publication-type="other" xlink:type="simple">Wallington, T. J., Ellermann, T., and Nielsen, O. J.: Atmospheric chemistry of dimethylsulfide: UV spectra and self-reaction kinetics of CH&lt;sub&gt;3&lt;/sub&gt;SCH&lt;sub&gt;2&lt;/sub&gt; and CH&lt;sub&gt;3&lt;/sub&gt;SCH&lt;sub&gt;2&lt;/sub&gt;O&lt;sub&gt;2&lt;/sub&gt; radicals and kinetics of the reactions CH&lt;sub&gt;3&lt;/sub&gt;SCH&lt;sub&gt;2&lt;/sub&gt; + O&lt;sub&gt;2&lt;/sub&gt; CH&lt;sub&gt;3&lt;/sub&gt;SCH&lt;sub&gt;2&lt;/sub&gt;O&lt;sub&gt;2&lt;/sub&gt; and CH&lt;sub&gt;3&lt;/sub&gt;CH&lt;sub&gt;2&lt;/sub&gt;O&lt;sub&gt;2&lt;/sub&gt; + NO $\to $ CH&lt;sub&gt;3&lt;/sub&gt;SCH&lt;sub&gt;2&lt;/sub&gt;O&lt;sub&gt;2&lt;/sub&gt; + NO&lt;sub&gt;2&lt;/sub&gt;, J. Phys. Chem., 97, 8442–8449, 1993. </mixed-citation>
</ref>
<ref id="ref39">
<label>39</label><mixed-citation publication-type="other" xlink:type="simple">Wine, P. H., Kreutter, N. M., Gump, C. A., Ravishankara, A. R.: Kinetics of OH reactions with the atmospheric sulfur compounds H&lt;sub&gt;2&lt;/sub&gt;S, CH&lt;sub&gt;3&lt;/sub&gt;SH, CH&lt;sub&gt;3&lt;/sub&gt;SCH&lt;sub&gt;3&lt;/sub&gt;, CH&lt;sub&gt;3&lt;/sub&gt;SSCH&lt;sub&gt;3&lt;/sub&gt;, J. Phys. Chem., 85, 2660–2665, 1981. </mixed-citation>
</ref>
<ref id="ref40">
<label>40</label><mixed-citation publication-type="other" xlink:type="simple">Wood, R. and Bretherton, C. S.: Boundary Layer Depth, Entrainment, and Decoupling in the Cloud-Capped Subtropical and Tropical Marine Boundary Layer, J. Climate, 17, 3576–3588, 2004. </mixed-citation>
</ref>
<ref id="ref41">
<label>41</label><mixed-citation publication-type="other" xlink:type="simple">Yvon, S. A., Plane, J. M. C., Nien, C.-F., Cooper, D. J. and Saltzman, E. S.: The interaction between the nitrogen and sulfur cycles in the marine boundary layer, J. Geophys. Res., 101, 1379–1386, 1996. </mixed-citation>
</ref>
</ref-list>
</back>
</article>