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<front>
<journal-meta>
<journal-id journal-id-type="publisher">ACPD</journal-id>
<journal-title-group>
<journal-title>Atmospheric Chemistry and Physics Discussions</journal-title>
<abbrev-journal-title abbrev-type="publisher">ACPD</abbrev-journal-title>
</journal-title-group>
<issn pub-type="epub">1680-7375</issn>
<publisher><publisher-name>Copernicus GmbH</publisher-name>
<publisher-loc>Göttingen, Germany</publisher-loc>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.5194/acpd-11-29723-2011</article-id>
<title-group>
<article-title>Evaluating WRF-Chem aerosol indirect effects in Southeast Pacific marine stratocumulus during  VOCALS-REx</article-title>
</title-group>
<contrib-group><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Saide</surname>
<given-names>P. E.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Spak</surname>
<given-names>S. N.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Carmichael</surname>
<given-names>G. R.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Mena-Carrasco</surname>
<given-names>M. A.</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Howell</surname>
<given-names>S.</given-names>
</name>
<xref ref-type="aff" rid="aff3">
<sup>3</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Leon</surname>
<given-names>D. C.</given-names>
</name>
<xref ref-type="aff" rid="aff4">
<sup>4</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Snider</surname>
<given-names>J. R.</given-names>
</name>
<xref ref-type="aff" rid="aff4">
<sup>4</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Bandy</surname>
<given-names>A. R.</given-names>
</name>
<xref ref-type="aff" rid="aff5">
<sup>5</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Collett</surname>
<given-names>J. L.</given-names>
</name>
<xref ref-type="aff" rid="aff6">
<sup>6</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Benedict</surname>
<given-names>K. B.</given-names>
</name>
<xref ref-type="aff" rid="aff6">
<sup>6</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>de Szoeke</surname>
<given-names>S. P.</given-names>
</name>
<xref ref-type="aff" rid="aff7">
<sup>7</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Hawkins</surname>
<given-names>L. N.</given-names>
</name>
<xref ref-type="aff" rid="aff8">
<sup>8</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Allen</surname>
<given-names>G.</given-names>
</name>
<xref ref-type="aff" rid="aff9">
<sup>9</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Crawford</surname>
<given-names>I.</given-names>
</name>
<xref ref-type="aff" rid="aff9">
<sup>9</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Crosier</surname>
<given-names>J.</given-names>
</name>
<xref ref-type="aff" rid="aff9">
<sup>9</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Springston</surname>
<given-names>S. R.</given-names>
</name>
<xref ref-type="aff" rid="aff10">
<sup>10</sup>
</xref>
</contrib>
</contrib-group><aff id="aff1">
<label>1</label>
<addr-line>Center for Global and Regional Environmental Research (CGRER), University of Iowa, Iowa City, Iowa, USA</addr-line>
</aff>
<aff id="aff2">
<label>2</label>
<addr-line>Center for Sustainability Research, Universidad Andrés Bello, Santiago, Chile</addr-line>
</aff>
<aff id="aff3">
<label>3</label>
<addr-line>Department of Oceanography, University of Hawaii at Manoa, Honolulu, USA</addr-line>
</aff>
<aff id="aff4">
<label>4</label>
<addr-line>Department of Atmospheric Science, University of Wyoming, Laramie, Wyoming, USA</addr-line>
</aff>
<aff id="aff5">
<label>5</label>
<addr-line>Department of Chemistry, Drexel University, Philadelphia, PA, USA</addr-line>
</aff>
<aff id="aff6">
<label>6</label>
<addr-line>Colorado State University, Department of Atmospheric Science, Fort Collins, CO, USA</addr-line>
</aff>
<aff id="aff7">
<label>7</label>
<addr-line>Oregon State University, College of Oceanic and Atmospheric Sciences, Corvallis, OR, USA</addr-line>
</aff>
<aff id="aff8">
<label>8</label>
<addr-line>Harvey Mudd College, Department of Chemistry, Claremont, CA, USA</addr-line>
</aff>
<aff id="aff9">
<label>9</label>
<addr-line>Centre for Atmospheric Science, University of Manchester, Manchester, M13 9PL, UK</addr-line>
</aff>
<aff id="aff10">
<label>10</label>
<addr-line>Brookhaven National Laboratory, Upton, MA, USA</addr-line>
</aff>
<pub-date pub-type="epub">
<day>04</day>
<month>11</month>
<year>2011</year>
</pub-date>
<volume>11</volume>
<issue>11</issue>
<fpage>29723</fpage>
<lpage>29775</lpage>
<permissions>
<license xlink:type="simple">
<license-p>This is an open-access article ditributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.</license-p>
</license>
</permissions>
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<self-uri xlink:href="http://www.atmos-chem-phys-discuss.net/11/29723/2011/acpd-11-29723-2011.pdf">The full text article is available as a PDF file from http://www.atmos-chem-phys-discuss.net/11/29723/2011/acpd-11-29723-2011.pdf</self-uri>
<abstract>
<p>We evaluate a regional-scale simulation with the WRF-Chem model for the VAMOS (Variability of the
  American Monsoon Systems) Ocean-Cloud-Atmosphere-Land Study Regional Experiment (VOCALS-REx),
  which sampled the Southeast Pacific&apos;s persistent stratocumulus deck. Evaluation of VOCALS-REx
  ship-based and aircraft observations focuses on analyzing how aerosol loading affects marine
  boundary layer (MBL) dynamics and cloud microphysics. We compare local time series and
  campaign-averaged longitudinal gradients, and highlight differences in model simulations with (W)
  and without wet (NW) deposition processes. The higher aerosol loadings in the NW case produce
  considerable changes in MBL dynamics and cloud microphysics, in accordance with the established
  conceptual model of aerosol indirect effects. These include increase in cloud albedo, increase in
  MBL and cloud heights, drizzle suppression, increase in liquid water content, and increase in
  cloud lifetime. Moreover, better statistical representation of aerosol mass and number
  concentration improves model fidelity in reproducing observed spatial and temporal variability in
  cloud properties, including top and base height, droplet concentration, water content, rain rate,
  optical depth (COD) and liquid water path (LWP). Together, these help to quantify confidence in
  WRF-Chem&apos;s modeled aerosol-cloud interactions, while identifying structural and parametric
  uncertainties including: irreversibility in rain wet removal; overestimation of marine DMS and sea
  salt emissions and accelerated aqueous sulfate conversion. Our findings suggest that WRF-Chem
  simulates marine cloud-aerosol interactions at a level sufficient for applications in forecasting
  weather and air quality and studying aerosol climate forcing, including the reliability required
  for policy analysis and geo-engineering applications.</p>
</abstract>
<counts><page-count count="53"/></counts>
</article-meta>
</front>
<body/>
<back>
<ref-list>
<title>References</title>
<ref id="ref1">
<label>1</label><mixed-citation publication-type="other" xlink:type="simple"> Abdul-Razzak,~H. and Ghan,~S J.: A~parameterization of aerosol activation. 3. Sectional representation,~J. Geophys. Res., 107(D3), 4026, http://dx.doi.org/10.1029/2001JD000483doi:10.1029/2001JD000483, 2002. </mixed-citation>
</ref>
<ref id="ref2">
<label>2</label><mixed-citation publication-type="other" xlink:type="simple"> % Abel,~S J., Walters,~D N., and Allen,~G.: Evaluation of stratocumulus cloud prediction in the Met Office forecast model during VOCALS-REx, Atmos. Chem. Phys., 10, 10541-10559, http://dx.doi.org/10.5194/acp-10-10541-2010doi:10.5194/acp-10-10541-2010, 2010. % ### SELF-REFERENCE ### Abel,~S J., Walters,~D N., and Allen,~G.: Evaluation of stratocumulus cloud prediction in the Met Office forecast model during VOCALS-REx, Atmos. Chem. Phys., 10, 10541–10559, http://dx.doi.org/10.5194/acp-10-10541-2010doi:10.5194/acp-10-10541-2010, 2010. </mixed-citation>
</ref>
<ref id="ref3">
<label>3</label><mixed-citation publication-type="other" xlink:type="simple"> Albrecht,~B A.: Aerosols, cloud microphysics, and fractional cloudiness, Science, 245, 1227–1230, 1989. </mixed-citation>
</ref>
<ref id="ref4">
<label>4</label><mixed-citation publication-type="other" xlink:type="simple"> % Allen,~G., Coe,~H., Clarke,~A., Bretherton,~C., Wood,~R., Abel,~S J., Barrett,~P., Brown,~P., George,~R., Freitag,~S., McNaughton,~C., Howell,~S., Shank,~L., Kapustin,~V., Brekhovskikh,~V., Kleinman,~L., Lee,~Y.-~N., Springston,~S., Toniazzo,~T., Krejci,~R., Fochesatto,~J., Shaw,~G., Krecl,~P., Brooks,~B., McMeeking,~G., Bower,~K N., Williams,~P I., Crosier,~J., Crawford,~I., Connolly,~P., Allan,~J D., Covert,~D., Bandy,~A R., Russell,~L M., Trembath,~J., Bart,~M., McQuaid,~J B., Wang,~J., and Chand,~D.: South East Pacific atmospheric composition and variability sampled along 20\textdegree S during VOCALS-REx, Atmos. Chem. Phys., 11, 5237–5262, http://dx.doi.org/10.5194/acp-11-5237-2011doi:10.5194/acp-11-5237-2011, 2011. % ### SELF-REFERENCE ### Allen,~G., Coe,~H., Clarke,~A., Bretherton,~C., Wood,~R., Abel,~S J., Barrett,~P., Brown,~P., George,~R., Freitag,~S., McNaughton,~C., Howell,~S., Shank,~L., Kapustin,~V., Brekhovskikh,~V., Kleinman,~L., Lee,~Y.-N., Springston,~S., Toniazzo,~T., Krejci,~R., Fochesatto,~J., Shaw,~G., Krecl,~P., Brooks,~B., McMeeking,~G., Bower,~K N., Williams,~P I., Crosier,~J., Crawford,~I., Connolly,~P., Allan,~J D., Covert,~D., Bandy,~A R., Russell,~L M., Trembath,~J., Bart,~M., McQuaid,~J B., Wang,~J., and Chand,~D.: South East Pacific atmospheric composition and variability sampled along 20\degree S during VOCALS-REx, Atmos. Chem. Phys., 11, 5237–5262, http://dx.doi.org/10.5194/acp-11-5237-2011doi:10.5194/acp-11-5237-2011, 2011. </mixed-citation>
</ref>
<ref id="ref5">
<label>5</label><mixed-citation publication-type="other" xlink:type="simple"> % Andrejczuk,~M., Grabowski,~W W., Gadian,~A., and Burton,~R.: Limited-area modelling of % stratocumulus over South-Eastern Pacific, Atmos. Chem. Phys. Discuss., 11, 25517–25556, % http://dx.doi.org/10.5194/acpd-11–25517-2011doi:10.5194/acpd-11–25517-2011, 2011. Andrejczuk, M., Grabowski, W. W., Gadian, A., and Burton, R.: Limited-area modelling of stratocumulus over South-Eastern Pacific, Atmos. Chem. Phys. Discuss., 11, 25517–25556, http://dx.doi.org/10.5194/acpd-11-25517-2011doi:10.5194/acpd-11-25517-2011, 2011. </mixed-citation>
</ref>
<ref id="ref6">
<label>6</label><mixed-citation publication-type="other" xlink:type="simple"> Andronache,~C., Donner,~L J., Seman,~C J., Ramaswamy,~V., and Hemler,~R S.: Atmospheric sulfur and deep convective clouds in tropical Pacific: a~model study,~J. Geophys. Res., 104, 4005–4024, 1999. </mixed-citation>
</ref>
<ref id="ref7">
<label>7</label><mixed-citation publication-type="other" xlink:type="simple"> Arai,~K., Liang,~X M., and Liu,~Q.: Method for estimation of rain rate with Rayleigh and Mie scattering assumptions on the $Z−R$ relationship for different rainfall types, Adv. Space Res., 36(5), 813–817, 2005. </mixed-citation>
</ref>
<ref id="ref8">
<label>8</label><mixed-citation publication-type="other" xlink:type="simple"> Bator,~A. and Collett Jr.,~J L.: Cloud chemistry varies with drop size,~J. Geophys. Res., 102(D23), 28071–28078, http://dx.doi.org/10.1029/97JD02306doi:10.1029/97JD02306, 1997 </mixed-citation>
</ref>
<ref id="ref9">
<label>9</label><mixed-citation publication-type="other" xlink:type="simple"> Benedict,~K B., Lee,~T., and Collett Jr.,~J L.: Cloud water composition over the Southeastern Pacific Ocean during the VOCALS Regional Experiment, Atmos. Environ., http://dx.doi.org/10.1016/j.atmosenv.2011.10.029doi:10.1016/j.atmosenv.2011.10.029, in press, 2011. </mixed-citation>
</ref>
<ref id="ref10">
<label>10</label><mixed-citation publication-type="other" xlink:type="simple"> % Berner,~A H., Bretherton,~C S., and Wood,~R.: Large-eddy simulation of mesoscale dynamics and % entrainment around a~pocket of open cells observed in VOCALS RF06, Atmos. Chem. Phys. Discuss., % 11, 13317–13353, http://dx.doi.org/10.5194/acpd-11–13317-2011doi:10.5194/acpd-11–13317-2011, 2011. Berner, A. H., Bretherton, C. S., and Wood, R.: Large-eddy simulation of mesoscale dynamics and entrainment around a pocket of open cells observed in VOCALS-REx RF06, Atmos. Chem. Phys., 11, 10525–10540, http://dx.doi.org/10.5194/acp-11-10525-2011doi:10.5194/acp-11-10525-2011, 2011. </mixed-citation>
</ref>
<ref id="ref11">
<label>11</label><mixed-citation publication-type="other" xlink:type="simple"> Bohren,~C F. and Huffman,~D R.: Absorption of Light by Small Particles, Wiley, New York, 1983. </mixed-citation>
</ref>
<ref id="ref12">
<label>12</label><mixed-citation publication-type="other" xlink:type="simple"> % Bretherton,~C S., Wood,~R., George,~R C., Leon,~D., Allen,~G., and Zheng,~X.: Southeast Pacific stratocumulus clouds, precipitation and boundary layer structure sampled along 20\degree S during VOCALS-REx, Atmos. Chem. Phys., 10, 10639–10654, http://dx.doi.org/10.5194/acp-10–10639-2010doi:10.5194/acp-10–10639-2010, 2010. % ### SELF-REFERENCE ### Bretherton,~C S., Wood,~R., George,~R C., Leon,~D., Allen,~G., and Zheng,~X.: Southeast Pacific stratocumulus clouds, precipitation and boundary layer structure sampled along 20° S during VOCALS-REx, Atmos. Chem. Phys., 10, 10639–10654, http://dx.doi.org/10.5194/acp-10-10639-2010doi:10.5194/acp-10-10639-2010, 2010. </mixed-citation>
</ref>
<ref id="ref13">
<label>13</label><mixed-citation publication-type="other" xlink:type="simple"> Cess, ~R D., Potter, ~G L., Blanchet, ~J P., Boer, ~G J., Ghan, ~S J., Kiehl, ~J T., Le Treut, ~H., Li, ~Z X., Liang, ~X Z., Mitchell, ~J F B., and others: Interpretation of cloud-climate feedback as produced by 14 atmospheric general circulation models, Science, 245, 513–516, 1989. </mixed-citation>
</ref>
<ref id="ref14">
<label>14</label><mixed-citation publication-type="other" xlink:type="simple"> % Chand,~D., Hegg,~D A., Wood,~R., Shaw,~G E., Wallace,~D., and Covert,~D S.: Source attribution of climatically important aerosol properties measured at Paposo (Chile) during VOCALS, Atmos. Chem. Phys., 10, 10789–10801, http://dx.doi.org/10.5194/acp-10–10789-2010doi:10.5194/acp-10–10789-2010, 2010. % ### SELF-REFERENCE ### Chand,~D., Hegg,~D A., Wood,~R., Shaw,~G E., Wallace,~D., and Covert,~D S.: Source attribution of climatically important aerosol properties measured at Paposo (Chile) during VOCALS, Atmos. Chem. Phys., 10, 10789–10801, http://dx.doi.org/10.5194/acp-10-10789-2010doi:10.5194/acp-10-10789-2010, 2010. </mixed-citation>
</ref>
<ref id="ref15">
<label>15</label><mixed-citation publication-type="other" xlink:type="simple"> % Chapman,~E G., Gustafson Jr.,~W I., Easter,~R C., Barnard,~J C., Ghan,~S J., Pekour,~M S., and Fast,~J D.: Coupling aerosol-cloud-radiative processes in the WRF-Chem model: Investigating the radiative impact of elevated point sources, Atmos. Chem. Phys., 9, 945–964, http://dx.doi.org/10.5194/acp-9–945-2009doi:10.5194/acp-9–945-2009, 2009. % ### SELF-REFERENCE ### Chapman,~E G., Gustafson~Jr.,~W I., Easter,~R C., Barnard,~J C., Ghan,~S J., Pekour,~M S., and Fast,~J D.: Coupling aerosol-cloud-radiative processes in the WRF-Chem model: Investigating the radiative impact of elevated point sources, Atmos. Chem. Phys., 9, 945–964, http://dx.doi.org/10.5194/acp-9-945-2009doi:10.5194/acp-9-945-2009, 2009. </mixed-citation>
</ref>
<ref id="ref16">
<label>16</label><mixed-citation publication-type="other" xlink:type="simple"> Chen,~S.-H. and Sun,~W.-~Y.: A~one-dimensional time dependent cloud model,~J. Meteorol. Soc. Japan, 80, 99–118, 2002. </mixed-citation>
</ref>
<ref id="ref17">
<label>17</label><mixed-citation publication-type="other" xlink:type="simple"> % Chen,~Y.-~C., Xue,~L., Lebo,~Z J., Wang,~H., Rasmussen,~R M., and Seinfeld,~J H.: % A~comprehensive numerical study of aerosol-cloud-precipitation interactions in marine % stratocumulus, Atmos. Chem. Phys. Discuss., 11, 15497–15550, http://dx.doi.org/10.5194/acpd-11–15497-2011doi:10.5194/acpd-11–15497-2011, % 2011. Chen, Y.-C., Xue, L., Lebo, Z. J., Wang, H., Rasmussen, R. M., and Seinfeld, J. H.: A comprehensive numerical study of aerosol-cloud-precipitation interactions in marine stratocumulus, Atmos. Chem. Phys., 11, 9749–9769, http://dx.doi.org/10.5194/acp-11-9749-2011doi:10.5194/acp-11-9749-2011, 2011. </mixed-citation>
</ref>
<ref id="ref18">
<label>18</label><mixed-citation publication-type="other" xlink:type="simple"> Chou,~M D., Suarez,~M J., Ho,~C H., Yan,~M M H., and Lee,~K T.: Parameterizations for cloud overlapping and shortwave single-scattering properties for use in general circulation and cloud ensemble models,~J. Climate, 11, 202–214, 1998. </mixed-citation>
</ref>
<ref id="ref19">
<label>19</label><mixed-citation publication-type="other" xlink:type="simple"> Comstock,~K K., Wood,~R., Yuter,~S E., and Bretherton,~C S.: Reflectivity and rain rate in and below drizzling stratocumulus,~Q J. Roy. Meteorol. Soc., 130, 2891–2918, 2004. </mixed-citation>
</ref>
<ref id="ref20">
<label>20</label><mixed-citation publication-type="other" xlink:type="simple"> Corvalán,~R M., Osses,~M., Urrutia,~C M., Gonzalez,~P A.: Estimating traffic emissions using demographic and socio-economic variables in 18 Chilean urban areas, Popul. Environ., 27, 63–87, 2005. </mixed-citation>
</ref>
<ref id="ref21">
<label>21</label><mixed-citation publication-type="other" xlink:type="simple"> Davies,~D K., Ilavajhala,~S., Wong,~M M., and Justice,~C O.: Fire information for resource management system: archiving and distributing MODIS active fire data, IEEE T. Geosci. Remote Sens., 47(1), 72–79, http://dx.doi.org/10.1109/TGRS.2008.2002076doi:10.1109/TGRS.2008.2002076, 2009. </mixed-citation>
</ref>
<ref id="ref22">
<label>22</label><mixed-citation publication-type="other" xlink:type="simple"> DICTUC: Actualización del Invexntario de Emisiones de Contaminantes Atmosféricos en la Región Metropolitana 2005, Prepared for Chilean Ministry of Environment, Santiago, Chile, 2007. </mixed-citation>
</ref>
<ref id="ref23">
<label>23</label><mixed-citation publication-type="other" xlink:type="simple"> Easter,~R C., Ghan,~S J., Zhang,~Y., Saylor,~R D., Chapman,~E G., Laulainen,~N S., Abdul-Razzak,~H., Leung,~L R., Bian,~X., and Zaveri,~R A.: MIRAGE: Model description and evaluation of aerosols and trace gases,~J. Geophys. Res., 109, D20210, http://dx.doi.org/10.1029/2004JD004571doi:10.1029/2004JD004571, 2004. </mixed-citation>
</ref>
<ref id="ref24">
<label>24</label><mixed-citation publication-type="other" xlink:type="simple"> % Emmons,~L K., Walters,~S., Hess,~P G., Lamarque,~J.-~F., Pfister,~G G., Fillmore,~D., Granier,~C., Guenther,~A., Kinnison,~D., Laepple,~T., Orlando,~J., Tie,~X., Tyndall,~G., Wiedinmyer,~C., Baughcum,~S L., and Kloster,~S.: Description and evaluation of the Model for Ozone and Related chemical Tracers, version 4 (MOZART-4), Geosci. Model Dev., 3, 43–67, http://dx.doi.org/10.5194/gmd-3–43-2010doi:10.5194/gmd-3–43-2010, 2010. % ### SELF-REFERENCE ### Emmons,~L K., Walters,~S., Hess,~P G., Lamarque,~J.-F., Pfister,~G G., Fillmore,~D., Granier,~C., Guenther,~A., Kinnison,~D., Laepple,~T., Orlando,~J., Tie,~X., Tyndall,~G., Wiedinmyer,~C., Baughcum,~S L., and Kloster,~S.: Description and evaluation of the Model for Ozone and Related chemical Tracers, version 4 (MOZART-4), Geosci. Model Dev., 3, 43–67, http://dx.doi.org/10.5194/gmd-3-43-2010doi:10.5194/gmd-3-43-2010, 2010. </mixed-citation>
</ref>
<ref id="ref25">
<label>25</label><mixed-citation publication-type="other" xlink:type="simple"> Erickson,~D J.: A~stability dependent theory for air-sea gas exchange,~J. Geophys. Res., 98, 8471–8488, 1993. </mixed-citation>
</ref>
<ref id="ref26">
<label>26</label><mixed-citation publication-type="other" xlink:type="simple"> Errico,~R M., Bauer,~P., and Mahfouf,~J F.: Issues regarding the assimilation of cloud and precipitation data,~J. Atmos. Sci., 64, 3785–3798, 2007. </mixed-citation>
</ref>
<ref id="ref27">
<label>27</label><mixed-citation publication-type="other" xlink:type="simple"> Fahey,~K M. and Pandis,~S N.: Optimizing model performance: variable size resolution in cloud chemistry modeling, Atmos. Environ., 35, 4471–4478, 2001. </mixed-citation>
</ref>
<ref id="ref28">
<label>28</label><mixed-citation publication-type="other" xlink:type="simple"> Fast,~J D., Gustafson~Jr.,~W I., Easter,~R C., Zaveri,~R A., Barnard,~J C., Chapman,~E G., Grell,~G A., and Peckham,~S E.: Evolution of ozone, particulates, and aerosol direct radiative forcing in the vicinity of Houston using a~fully coupled meteorology-chemistry-aerosol model, J. Geophys. Res., 111, D21305, http://dx.doi.org/10.1029/2005JD006721doi:10.1029/2005JD006721, 2006. </mixed-citation>
</ref>
<ref id="ref29">
<label>29</label><mixed-citation publication-type="other" xlink:type="simple"> Feingold,~G., Kreidenweis,~S M., Stevens,~B., and Cotton,~W R.: Numerical simulations of stratocumulus processing of cloud condensation nuclei through collision-coalescence, J. Geophys. Res., 101, 21391–21402, http://dx.doi.org/10.1029/96JD01552doi:10.1029/96JD01552, 1996. </mixed-citation>
</ref>
<ref id="ref30">
<label>30</label><mixed-citation publication-type="other" xlink:type="simple"> Feingold,~G., Walko,~R L., Stevens,~B., and Cotton,~W R.: Simulations of marine stratocumulus using a~new microphysical parameterization scheme, Atmos. Res., 47–48, 505–528, 1998. </mixed-citation>
</ref>
<ref id="ref31">
<label>31</label><mixed-citation publication-type="other" xlink:type="simple"> Feingold,~G., Koren,~I., Wang,~H., Xue,~H., and Brewer,~W A.: Precipitation-generated oscillations in open cellular cloud fields, Nature, 466, 849–852, http://dx.doi.org/10.1038/nature09314doi:10.1038/nature09314, 2010. </mixed-citation>
</ref>
<ref id="ref32">
<label>32</label><mixed-citation publication-type="other" xlink:type="simple"> Freitas,~S R., Longo,~K M., and Andreae,~M O.: Impact of including the plume rise of vegetation fires in numerical simulations of associated atmospheric pollutants, Geophys. Res. Lett., 33, L17808, http://dx.doi.org/10.1029/2006GL026608doi:10.1029/2006GL026608, 2006. </mixed-citation>
</ref>
<ref id="ref33">
<label>33</label><mixed-citation publication-type="other" xlink:type="simple"> % Freitas,~S R., Longo,~K M., Chatfield,~R., Latham,~D., Silva Dias,~M A F., Andreae,~M O., Prins,~E., Santos,~J C., Gielow,~R., and Carvalho Jr.,~J A.: Including the sub-grid scale plume rise of vegetation fires in low resolution atmospheric transport models, Atmos. Chem. Phys., 7, 3385–3398, http://dx.doi.org/10.5194/acp-7–3385-2007doi:10.5194/acp-7–3385-2007, 2007. % ### SELF-REFERENCE ### Freitas,~S R., Longo,~K M., Chatfield,~R., Latham,~D., Silva~Dias,~M A F., Andreae,~M O., Prins,~E., Santos,~J C., Gielow,~R., and Carvalho~Jr.,~J A.: Including the sub-grid scale plume rise of vegetation fires in low resolution atmospheric transport models, Atmos. Chem. Phys., 7, 3385–3398, http://dx.doi.org/10.5194/acp-7-3385-2007doi:10.5194/acp-7-3385-2007, 2007. </mixed-citation>
</ref>
<ref id="ref34">
<label>34</label><mixed-citation publication-type="other" xlink:type="simple"> Garreaud,~R D. and Muñoz,~R C.: The low-level jet off the west coast of subtropical South America: structure and variability, Mon. Weather Rev., 133, 2246–2261, 2005. </mixed-citation>
</ref>
<ref id="ref35">
<label>35</label><mixed-citation publication-type="other" xlink:type="simple"> % Ghan,~S J. and Easter,~R C.: Impact of cloud-borne aerosol representation on aerosol direct % and indirect effects, Atmos. Chem. Phys., 6, 4163-4174, 2006. ### SELF-REFERENCE ### Ghan,~S J. and Easter,~R C.: Impact of cloud-borne aerosol representation on aerosol direct and indirect effects, Atmos. Chem. Phys., 6, 4163–4174, http://dx.doi.org/10.5194/acp-6-4163-2006doi:10.5194/acp-6-4163-2006, 2006. </mixed-citation>
</ref>
<ref id="ref36">
<label>36</label><mixed-citation publication-type="other" xlink:type="simple"> Gong,~S., Barrie,~L A., and Blanchet,~J.-P.: Modeling sea salt aerosols in the atmosphere. 1: Model development, J. Geophys. Res., 102, 3805–3818, 1997. </mixed-citation>
</ref>
<ref id="ref37">
<label>37</label><mixed-citation publication-type="other" xlink:type="simple"> Graßl,~H.: Possible changes of planetary albedo due to aerosol particles, in: Man&apos;s Impact on Climate, edited by: Bach,~W., Pankrath,~J., and Kellogg,~W., Elsevier, New York, 1979. </mixed-citation>
</ref>
<ref id="ref38">
<label>38</label><mixed-citation publication-type="other" xlink:type="simple"> Grell,~G A., Peckham,~S E., Schmitz,~R., McKeen,~S A., Frost,~G., Skamarock,~W C., and Eder,~B.: Fully coupled \qutonline chemistry within the WRF model, Atmos. Environ. 39, 6957–6975, 2005. </mixed-citation>
</ref>
<ref id="ref39">
<label>39</label><mixed-citation publication-type="other" xlink:type="simple"> % Guenther,~A., Karl,~T., Harley,~P., Wiedinmyer,~C., Palmer,~P I., and Geron,~C.: Estimates of global terrestrial isoprene emissions using MEGAN (Model of Emissions of Gases and Aerosols from Nature), Atmos. Chem. Phys., 6, 3181–3210, http://dx.doi.org/10.5194/acp-6–3181-2006doi:10.5194/acp-6–3181-2006, 2006. % ### SELF-REFERENCE ### Guenther,~A., Karl,~T., Harley,~P., Wiedinmyer,~C., Palmer,~P I., and Geron,~C.: Estimates of global terrestrial isoprene emissions using MEGAN (Model of Emissions of Gases and Aerosols from Nature), Atmos. Chem. Phys., 6, 3181–3210, http://dx.doi.org/10.5194/acp-6-3181-2006doi:10.5194/acp-6-3181-2006, 2006. </mixed-citation>
</ref>
<ref id="ref40">
<label>40</label><mixed-citation publication-type="other" xlink:type="simple"> Gustafson Jr.,~W I., Chapman,~E G., Ghan,~S J., Easter,~R C., Fast, and~J D.: Impact on modeled cloud characteristics due to simplified treatment of uniform cloud condensation nuclei during NEAQS 2004, Geophys. Res. Lett., 34, L19809, http://dx.doi.org/10.1029/2007GL030021doi:10.1029/2007GL030021, 2007. </mixed-citation>
</ref>
<ref id="ref41">
<label>41</label><mixed-citation publication-type="other" xlink:type="simple"> Hawkins,~L N., Russell,~L M., Covert,~D S., Quinn,~P K., and Bates,~T S.: Carboxylic acids, sulfates, and organosulfates in processed continental organic aerosol over the Southeast Pacific Ocean during VOCALS-REx 2008,~J. Geophys. Res., 115, D13201, http://dx.doi.org/10.1029/2009JD013276doi:10.1029/2009JD013276, 2010. </mixed-citation>
</ref>
<ref id="ref42">
<label>42</label><mixed-citation publication-type="other" xlink:type="simple"> % Hind,~A J., Rauschenberg,~C D., Johnson,~J E., Yang,~M., and Matrai,~P A.: The use of algorithms to predict surface seawater dimethyl sulphide concentrations in the SE Pacific, a~region of steep gradients in primary productivity, biomass and mixed layer depth, Biogeosciences, 8, 1–16, http://dx.doi.org/10.5194/bg-8–1-2011doi:10.5194/bg-8–1-2011, 2011. % ### SELF-REFERENCE ### Hind,~A J., Rauschenberg,~C D., Johnson,~J E., Yang,~M., and Matrai,~P A.: The use of algorithms to predict surface seawater dimethyl sulphide concentrations in the SE Pacific, a region of steep gradients in primary productivity, biomass and mixed layer depth, Biogeosciences, 8, 1–16, http://dx.doi.org/10.5194/bg-8-1-2011doi:10.5194/bg-8-1-2011, 2011. </mixed-citation>
</ref>
<ref id="ref43">
<label>43</label><mixed-citation publication-type="other" xlink:type="simple"> Hoffmann,~M R. and Calvert,~J G.: Chemical transformation modules for Eulerian acid deposition models, Vol 2, in: The Aqueous-Phase Chemistry, EPA/600/3-85/017, US Environmental Protection Agency, Research Triangle Park, NC, 1985. </mixed-citation>
</ref>
<ref id="ref44">
<label>44</label><mixed-citation publication-type="other" xlink:type="simple"> % Jones,~C R., Bretherton,~C S., and Leon,~D.: Coupled vs. decoupled boundary layers in VOCALS-REx, Atmos. Chem. Phys., 11, 7143–7153, http://dx.doi.org/10.5194/acp-11–7143-2011doi:10.5194/acp-11–7143-2011, 2011. % ### SELF-REFERENCE ### Jones,~C R., Bretherton,~C S., and Leon,~D.: Coupled vs. decoupled boundary layers in VOCALS-REx, Atmos. Chem. Phys., 11, 7143–7153, http://dx.doi.org/10.5194/acp-11-7143-2011doi:10.5194/acp-11-7143-2011, 2011. </mixed-citation>
</ref>
<ref id="ref45">
<label>45</label><mixed-citation publication-type="other" xlink:type="simple"> Jorquera,~H. and Castro,~J.: Analysis of urban pollution episodes by inverse modeling, Atmos. Environ. 44, 42–54, 2010. </mixed-citation>
</ref>
<ref id="ref46">
<label>46</label><mixed-citation publication-type="other" xlink:type="simple"> % Kanakidou,~M., Seinfeld,~J H., Pandis,~S N., Barnes,~I., Dentener,~F J., Facchini,~M C., Van Dingenen,~R., Ervens,~B., Nenes,~A., Nielsen,~C J., Swietlicki,~E., Putaud,~J P., Balkanski,~Y., Fuzzi,~S., Horth,~J., Moortgat,~G K., Winterhalter,~R., Myhre,~C E L., Tsigaridis,~K., Vignati,~E., Stephanou,~E G., and Wilson,~J.: Organic aerosol and global climate modelling: a~review, Atmos. Chem. Phys., 5, 1053–1123, http://dx.doi.org/10.5194/acp-5–1053–2005doi:10.5194/acp-5–1053–2005, 2005. % ### SELF-REFERENCE ### Kanakidou,~M., Seinfeld,~J H., Pandis,~S N., Barnes,~I., Dentener,~F J., Facchini,~M C., Van~Dingenen,~R., Ervens,~B., Nenes,~A., Nielsen,~C J., Swietlicki,~E., Putaud,~J P., Balkanski,~Y., Fuzzi,~S., Horth,~J., Moortgat,~G K., Winterhalter,~R., Myhre,~C E L., Tsigaridis,~K., Vignati,~E., Stephanou,~E G., and Wilson,~J.: Organic aerosol and global climate modelling: a review, Atmos. Chem. Phys., 5, 1053–1123, http://dx.doi.org/10.5194/acp-5-1053-2005doi:10.5194/acp-5-1053-2005, 2005. </mixed-citation>
</ref>
<ref id="ref47">
<label>47</label><mixed-citation publication-type="other" xlink:type="simple"> KAS: \qutAnálisis General del Impacto Social y Económico de la Norma de  Emisión Para Termoeléctricas. Chilean Ministry of the Environment, available at: http://www.sinia.cl/1292/articles-44963_informe_final_term.pdf,  last accessed November 2011, 2009. </mixed-citation>
</ref>
<ref id="ref48">
<label>48</label><mixed-citation publication-type="other" xlink:type="simple"> % Kazil,~J., Wang,~H., Feingold,~G., Clarke,~A D., Snider,~J R., and Bandy,~A R.: Modeling chemical and aerosol processes in the transition from closed to open cells during VOCALS-REx, Atmos. Chem. Phys., 11, 7491–7514, http://dx.doi.org/10.5194/acp-11–7491-2011doi:10.5194/acp-11–7491-2011, 2011. % ### SELF-REFERENCE ### Kazil,~J., Wang,~H., Feingold,~G., Clarke,~A D., Snider,~J R., and Bandy,~A R.: Modeling chemical and aerosol processes in the transition from closed to open cells during VOCALS-REx, Atmos. Chem. Phys., 11, 7491–7514, http://dx.doi.org/10.5194/acp-11-7491-2011doi:10.5194/acp-11-7491-2011, 2011. </mixed-citation>
</ref>
<ref id="ref49">
<label>49</label><mixed-citation publication-type="other" xlink:type="simple"> Khairoutdinov,~M. and Kogan,~Y.: A~new cloud physics parameterization in a~large-eddy simulation model of marine stratocumulus, Mon. Weather Rev. 128, 229–243, 2000. </mixed-citation>
</ref>
<ref id="ref50">
<label>50</label><mixed-citation publication-type="other" xlink:type="simple"> King,~M D., Platnick,~S., Hubanks,~P A., Arnold,~G T., Moody,~E G., Wind,~G., and Wind,~B.: Collection 005 change summary for the MODIS cloud optical property (06_OD) algorithm, available at: http://modis-atmos.gsfc.nasa.gov/C005_Changes/C005_CloudOpticalProperties_ver311.pdf, last accessed November 2011, 2006. </mixed-citation>
</ref>
<ref id="ref51">
<label>51</label><mixed-citation publication-type="other" xlink:type="simple"> % Kleinman,~L I., Daum,~P H., Lee,~Y.-~N., Lewis,~E R., Sedlacek III,~A J., Senum,~G I., Springston,~S R., Wang,~J., Hubbe,~J., Jayne,~J., Min,~Q., Yum,~S S., and Allen,~G.: Aerosol concentration and size distribution measured below, in, and above cloud from the DOE G-1 during VOCALS-REx, Atmos. Chem. Phys. Discuss., 11, 17289–17336, http://dx.doi.org/10.5194/acpd-11–17289-2011doi:10.5194/acpd-11–17289-2011, 2011. % ### SELF-REFERENCE ### Kleinman,~L I., Daum,~P H., Lee,~Y.-N., Lewis,~E R., Sedlacek~III,~A J., Senum,~G I., Springston,~S R., Wang,~J., Hubbe,~J., Jayne,~J., Min,~Q., Yum,~S S., and Allen,~G.: Aerosol concentration and size distribution measured below, in, and above cloud from the DOE G-1 during VOCALS-REx, Atmos. Chem. Phys. Discuss., 11, 17289–17336, http://dx.doi.org/10.5194/acpd-11-17289-2011doi:10.5194/acpd-11-17289-2011, 2011. </mixed-citation>
</ref>
<ref id="ref52">
<label>52</label><mixed-citation publication-type="other" xlink:type="simple"> Liepert,~B G.: Observed reductions of surface solar radiation at sites in the United States and worldwide from 1961 to 1990, Geophys. Res. Lett., 29, 1421, http://dx.doi.org/10.1029/2002GL014910doi:10.1029/2002GL014910, 2002. </mixed-citation>
</ref>
<ref id="ref53">
<label>53</label><mixed-citation publication-type="other" xlink:type="simple"> Liu,~Y., Daum,~P H., and McGraw,~R L.: Size truncation effect, threshold behavior, and a~new type of autoconversion parameterization, Geophys. Res. Lett., 32, L11811, http://dx.doi.org/10.1029/2005GL022636doi:10.1029/2005GL022636, 2005. </mixed-citation>
</ref>
<ref id="ref54">
<label>54</label><mixed-citation publication-type="other" xlink:type="simple"> Lohmann,~U.: A~glaciation indirect aerosol effect caused by soot aerosols, Geophys. Res. Lett., 29, 1052, http://dx.doi.org/10.1029/2001GL014 357doi:10.1029/2001GL014 357, 2002. </mixed-citation>
</ref>
<ref id="ref55">
<label>55</label><mixed-citation publication-type="other" xlink:type="simple"> % Lohmann, U. and Feichter, J.: Global indirect aerosol effects: a review, Atmos. Chem. Phys., 5, 715-737, http://dx.doi.org/10.5194/acp-5-715-2005doi:10.5194/acp-5-715-2005, 2005. ### SELF-REFERENCE ### Lohmann,~U. and Feichter,~J.: Global indirect aerosol effects: a review, Atmos. Chem. Phys., 5, 715–737, http://dx.doi.org/10.5194/acp-5-715-2005doi:10.5194/acp-5-715-2005, 2005. </mixed-citation>
</ref>
<ref id="ref56">
<label>56</label><mixed-citation publication-type="other" xlink:type="simple"> Lohmann,~U. and Lesins,~G.: Stronger constraints on the anthropogenic indirect aerosol effect, Science, 298, 1012–1016, 2002. </mixed-citation>
</ref>
<ref id="ref57">
<label>57</label><mixed-citation publication-type="other" xlink:type="simple"> Mätzler,~C.: MATLAB Functions for Mie Scattering and Absorption, Institut für Angewandte Physik, Research Report No. 2002–08, Bern, Switzerland, 2002. </mixed-citation>
</ref>
<ref id="ref58">
<label>58</label><mixed-citation publication-type="other" xlink:type="simple"> Martin,~G M., Johnson,~W., and Spice,~A.: The measurement and parameterization of effective radius of droplets in warm stratocumulus, J. Atmos. Sci., 51, 1823–1842, 1994. </mixed-citation>
</ref>
<ref id="ref59">
<label>59</label><mixed-citation publication-type="other" xlink:type="simple"> Martin,~L. and Damschen,~D E.: Aqueous oxidation of sulfur dioxide by hydrogen peroxide at low pH, Atmos. Environ., 15(9), 1615–1621, http://dx.doi.org/10.1016/0004-6981(81)90146-3doi:10.1016/0004-6981(81)90146-3, 1981. </mixed-citation>
</ref>
<ref id="ref60">
<label>60</label><mixed-citation publication-type="other" xlink:type="simple"> McArdle,~J V. and Hoffmann,~M R.: Kinetics and mechanism of the oxidation of aquated sulfur dioxide by hydrogen peroxide at low pH,~J. Phys. Chem., 87, 5425–5429, 1983. </mixed-citation>
</ref>
<ref id="ref61">
<label>61</label><mixed-citation publication-type="other" xlink:type="simple"> McFarquhar,~G M., Um,~J., Freer,~M., Baumgardner,~D., Kok,~G L., and Mace,~G.: The importance of small ice crystals to cirrus properties: observations from the Tropical Warm Pool International cloud Experiment (TWP-ICE), Geophys. Res. Lett., 57, L13803, http://dx.doi.org/10.1029/2007GL029865doi:10.1029/2007GL029865, 2007. </mixed-citation>
</ref>
<ref id="ref62">
<label>62</label><mixed-citation publication-type="other" xlink:type="simple"> Mena-Carrasco,~M., Ruiz,~P., Stambuk,~A., Stambuk,~L., Granifo,~R., and Jerardino,~M.: Antecedentes para la Revisión de las Normas Primarias de Calidad de Aire para Dióxido de Azufre, Monóxido de Carbono, Ozono, Dióxido de Nitrógeno. Chilean Ministry of the Environment, Santiago, Chile, 2010. </mixed-citation>
</ref>
<ref id="ref63">
<label>63</label><mixed-citation publication-type="other" xlink:type="simple"> Michel,~Y. and Auligné,~T.: Inhomogeneous background error modeling and estimation over Antarctica, Mon. Weather Rev., 138(6), 2229–2252, 2010. </mixed-citation>
</ref>
<ref id="ref64">
<label>64</label><mixed-citation publication-type="other" xlink:type="simple"> Mitra,~S K., Brinkmann,~J., and Pruppacher,~H R.: A~wind tunnel study on the drop-to-particle conversion,~J. Aerosol Sci., 23, 245–256, http://dx.doi.org/10.1016/0021–8502(92)90326-Qdoi:10.1016/0021–8502(92)90326-Q, 1992. </mixed-citation>
</ref>
<ref id="ref65">
<label>65</label><mixed-citation publication-type="other" xlink:type="simple"> Mlawer,~E J., Taubman,~S J., Brown,~P D., Iacono,~M J., Clough,~S A.: Radiative transfer for inhomogeneous atmosphere: RRTM, a~validated correlated-$k$ model for the longwave, J. Geophys. Res., 102, 16663–16682, 1997. </mixed-citation>
</ref>
<ref id="ref66">
<label>66</label><mixed-citation publication-type="other" xlink:type="simple"> Morrison,~H. and Pinto,~J O.: Mesoscale modeling of springtime Arctic mixed-phase stratiform clouds using a~new two-moment bulk microphysics scheme,~J. Atmos. Sci., 62, 3683–3704, 2005. </mixed-citation>
</ref>
<ref id="ref67">
<label>67</label><mixed-citation publication-type="other" xlink:type="simple"> Morrison,~H., Thompson,~G., and Tatarskii,~V.: Impact of cloud microphysics on the development of trailing stratiform precipitation in a~simulated squall line: comparison of one- and two-moment schemes, Mon. Weather Rev., 137, 991–1007, http://dx.doi.org/10.1175/2008mwr2556.1doi:10.1175/2008mwr2556.1, 2009. </mixed-citation>
</ref>
<ref id="ref68">
<label>68</label><mixed-citation publication-type="other" xlink:type="simple"> Muñoz,~R C. and Garreaud,~R D.: Dynamics of the low-level jet off the west coast of subtropical South America, Mon. Weather Rev., 133, 3661–3677, 2005. </mixed-citation>
</ref>
<ref id="ref69">
<label>69</label><mixed-citation publication-type="other" xlink:type="simple"> Nakanishi,~M. and Niino,~H.: An improved Mellor-Yamada level-3 model with condensation physics: its design and verification, Bound.-Lay. Meteorol. 112, 1–31, 2004. </mixed-citation>
</ref>
<ref id="ref70">
<label>70</label><mixed-citation publication-type="other" xlink:type="simple"> Ntelekos,~A A., Smith,~J A., Donner,~L J., Fast,~J D., Gustafson Jr.,~W I., Chapman,~E G., and Krajewski,~W F.: The effects of aerosols on intense convective precipitation in the Northeastern US, Q. J. Roy. Meteor. Soc., 135, 1367–1391, 2009. </mixed-citation>
</ref>
<ref id="ref71">
<label>71</label><mixed-citation publication-type="other" xlink:type="simple"> O&apos;Connor,~E J., Illingworth,~A J., and Hogan,~R J.: A~technique for autocalibration of cloud lidar,~J. Atmos. Oceanic Technol., 21, 777–786, 2004. </mixed-citation>
</ref>
<ref id="ref72">
<label>72</label><mixed-citation publication-type="other" xlink:type="simple"> Olivier,~J G J., Bouwman,~A F., Van der Maas,~C W M., and Berdowski,~J J M.: Emission Database for Global Atmospheric Research (EDGAR), Environ. Monit. Assess., 31, 93–106, 1994. </mixed-citation>
</ref>
<ref id="ref73">
<label>73</label><mixed-citation publication-type="other" xlink:type="simple"> Otkin,~J A. and~T J. Greenwald: Comparison of WRF model-simulated and MODIS-derived cloud data, Mon. Weather Rev., 136, 1957–1970, 2008. </mixed-citation>
</ref>
<ref id="ref74">
<label>74</label><mixed-citation publication-type="other" xlink:type="simple"> Otkin, J A., Greenwald,~T J., Sieglaff,~J., and Huang,~H.-L.: Validation of a~large-scale simulated brightness temperature dataset using SEVIRI satellite observations, J. Appl. Meteor. Climatol., 48, 1613–1626, http://dx.doi.org/10.1175/2009JAMC2142.1doi:10.1175/2009JAMC2142.1, 2009. </mixed-citation>
</ref>
<ref id="ref75">
<label>75</label><mixed-citation publication-type="other" xlink:type="simple"> Pincus,~R. and Baker,~M.: Effect of precipitation on the albedo susceptibility of clouds in the marine boundary layer, Nature, 372, 250–252, 1994. </mixed-citation>
</ref>
<ref id="ref76">
<label>76</label><mixed-citation publication-type="other" xlink:type="simple"> % Rahn,~D A. and Garreaud,~R.: Marine boundary layer over the subtropical southeast Pacific during VOCALS-REx – Part 1: Mean structure and diurnal cycle, Atmos. Chem. Phys., 10, 4491–4506, http://dx.doi.org/10.5194/acp-10–4491-2010doi:10.5194/acp-10–4491-2010, 2010. % ### SELF-REFERENCE ### Rahn,~D A. and Garreaud,~R.: Marine boundary layer over the subtropical southeast Pacific during VOCALS-REx – Part 1: Mean structure and diurnal cycle, Atmos. Chem. Phys., 10, 4491–4506, http://dx.doi.org/10.5194/acp-10-4491-2010doi:10.5194/acp-10-4491-2010, 2010. </mixed-citation>
</ref>
<ref id="ref77">
<label>77</label><mixed-citation publication-type="other" xlink:type="simple"> Ramanathan,~V., Cess,~R D., Harrison,~E F., Minnis,~P., Barkstrom,~B R., Ahmad,~E., and Hartmann,~D.: Cloud-radiative forcing and climate: results from the earth radiation budget experiment, Science, 243, 57–63, 1989. </mixed-citation>
</ref>
<ref id="ref78">
<label>78</label><mixed-citation publication-type="other" xlink:type="simple"> % Saide,~P., Osses,~A., Gallardo,~L., and Osses,~M.: Adjoint inverse modeling of a~CO emission inventory at the city scale: Santiago de Chile&apos;s case, Atmos. Chem. Phys. Discuss., 9, 6325–6361, http://dx.doi.org/10.5194/acpd-9–6325-2009doi:10.5194/acpd-9–6325-2009, 2009. % ### SELF-REFERENCE ### Saide,~P., Osses,~A., Gallardo,~L., and Osses,~M.: Adjoint inverse modeling of a CO emission inventory at the city scale: Santiago de Chile&apos;s case, Atmos. Chem. Phys. Discuss., 9, 6325–6361, http://dx.doi.org/10.5194/acpd-9-6325-2009doi:10.5194/acpd-9-6325-2009, 2009. </mixed-citation>
</ref>
<ref id="ref79">
<label>79</label><mixed-citation publication-type="other" xlink:type="simple"> Saide,~P E., Carmichael,~G R., Spak,~S N., Gallardo,~L., Osses,~A E., Mena-Carrasco,~M A., and Pagowski,~M.: Forecasting urban \chemPM_10 and \chemPM_2.5 pollution episodes in very stable nocturnal conditions and complex terrain using WRF-Chem CO tracer model, Atmos. Environ., 45(16), 2769–2780, http://dx.doi.org/10.1016/j.atmosenv.2011.02.001doi:10.1016/j.atmosenv.2011.02.001, 2011. </mixed-citation>
</ref>
<ref id="ref80">
<label>80</label><mixed-citation publication-type="other" xlink:type="simple"> Seinfeld,~J. and Pandis,~S.: Atmospheric Chemistry and Physics, 2nd edn., Wiley, Hoboken, New Jersey, USA, 478–483, 2006. </mixed-citation>
</ref>
<ref id="ref81">
<label>81</label><mixed-citation publication-type="other" xlink:type="simple"> Shah,~S., Rao,~B M., Kumar,~P., and Pal,~P K.: Verification of cloud cover forecast with INSAT observation over Western India,~J. Earth Syst. Sci., 119(6), 775–781, 2010. </mixed-citation>
</ref>
<ref id="ref82">
<label>82</label><mixed-citation publication-type="other" xlink:type="simple"> % Shank,~L M., Howell,~S., Clarke,~A D., Freitag,~S., Brekhovskikh,~V., Kapustin,~V., McNaughton,~C., Campos,~T., and Wood,~R.: Organic carbon and non-refractory aerosol over the remote Southeast Pacific: oceanic and combustion sources, Atmos. Chem. Phys. Discuss., 11, 16895–16932, http://dx.doi.org/10.5194/acpd-11–16895-2011doi:10.5194/acpd-11–16895-2011, 2011. % ### SELF-REFERENCE ### Shank,~L M., Howell,~S., Clarke,~A D., Freitag,~S., Brekhovskikh,~V., Kapustin,~V., McNaughton,~C., Campos,~T., and Wood,~R.: Organic carbon and non-refractory aerosol over the remote Southeast Pacific: oceanic and combustion sources, Atmos. Chem. Phys. Discuss., 11, 16895–16932, http://dx.doi.org/10.5194/acpd-11-16895-2011doi:10.5194/acpd-11-16895-2011, 2011. </mixed-citation>
</ref>
<ref id="ref83">
<label>83</label><mixed-citation publication-type="other" xlink:type="simple"> % Shrivastava,~M., Fast,~J., Easter,~R., Gustafson Jr.,~W I., Zaveri,~R A., Jimenez,~J L., Saide,~P., and Hodzic,~A.: Modeling organic aerosols in a~megacity: comparison of simple and complex representations of the volatility basis set approach, Atmos. Chem. Phys., 11, 6639–6662, http://dx.doi.org/10.5194/acp-11–6639-2011doi:10.5194/acp-11–6639-2011, 2011. % ### SELF-REFERENCE ### Shrivastava,~M., Fast,~J., Easter,~R., Gustafson~Jr.,~W I., Zaveri,~R A., Jimenez,~J L., Saide,~P., and Hodzic,~A.: Modeling organic aerosols in a megacity: comparison of simple and complex representations of the volatility basis set approach, Atmos. Chem. Phys., 11, 6639–6662, http://dx.doi.org/10.5194/acp-11-6639-2011doi:10.5194/acp-11-6639-2011, 2011. </mixed-citation>
</ref>
<ref id="ref84">
<label>84</label><mixed-citation publication-type="other" xlink:type="simple"> Skamarock,~W C., Klemp,~J B., Dudhia,~J., Gill,~D O., Barker,~D M., Duda,~M G., Huang,~X.-~Y., Wang,~W., and Powers,~J G.: A~Description of the Advanced Research WRF, Version 3. Technical Report NCAR/TN475$+$ST~R. National Center for Atmospheric Research Technical Note, Boulder, Colorado, 2008. </mixed-citation>
</ref>
<ref id="ref85">
<label>85</label><mixed-citation publication-type="other" xlink:type="simple"> Slingo,~A.: A~GCM parameterization for the shortwave radiative properties of water clouds, J. Atmos. Sci., 46, 1419–1427, 1989. </mixed-citation>
</ref>
<ref id="ref86">
<label>86</label><mixed-citation publication-type="other" xlink:type="simple"> Solomon,~S., Qin,~D., Manning,~M., Alley,~R B., Berntsen,~T., Bindoff,~N L., Chen,~Z., Chidthaisong,~A., Gregory,~J M., Hegerl,~G C., Heimann,~M., Hewitson,~B., Hoskins,~B J., Joos,~F., Jouzel,~J., Kattsov,~V., Lohmann,~U., Matsuno,~T., Molina,~M., Nicholls,~N., Overpeck,~J., Raga,~G., Ramaswamy,~V., Ren,~J., Rusticucci,~M., Somerville,~R., Stocker,~T F., Whetton,~P., Wood,~R A., and Wratt,~D.: Technical Summary. In: Climate Change 2007: The Physical Science Basis. Contribution of Working Group I to the Fourth Assessment Report of the Intergovernmental Panel on Climate Change, edited by: Solomon,~S., Qin,~D., Manning,~M., Chen,~Z., Marquis,~M., Averyt,~K B., Tignor,~M., and Miller,~H L., Cambridge University Press, Cambridge, New York, 2007. </mixed-citation>
</ref>
<ref id="ref87">
<label>87</label><mixed-citation publication-type="other" xlink:type="simple"> Spak,~S N., Mena-Carrasco,~M A., and Carmichael,~G R.: Atmospheric transport of anthropogenic oxidized sulfur over the Southeast Pacific during VOCALS REx, CLIVAR Exchanges, 53, 20–21, 2010. </mixed-citation>
</ref>
<ref id="ref88">
<label>88</label><mixed-citation publication-type="other" xlink:type="simple"> % Sun,~R., Moorthi,~S., Xiao,~H., and Mechoso,~C R.: Simulation of low clouds in the Southeast Pacific by the NCEP GFS: sensitivity to vertical mixing, Atmos. Chem. Phys., 10, 12261–12272, http://dx.doi.org/10.5194/acp-10–12261–2010doi:10.5194/acp-10–12261–2010, 2010. % ### SELF-REFERENCE ### Sun,~R., Moorthi,~S., Xiao,~H., and Mechoso,~C R.: Simulation of low clouds in the Southeast Pacific by the NCEP GFS: sensitivity to vertical mixing, Atmos. Chem. Phys., 10, 12261–12272, http://dx.doi.org/10.5194/acp-10-12261-2010doi:10.5194/acp-10-12261-2010, 2010. </mixed-citation>
</ref>
<ref id="ref89">
<label>89</label><mixed-citation publication-type="other" xlink:type="simple"> de Szoeke,~S P., Fairall,~C W., Wolfe,~D E., Bariteau,~L., and Zuidema,~P.: Surface flux observations on the southeastern tropical pacific ocean and attribution of SST errors in coupled ocean-atmosphere models,~J. Climate, 23, 4152–4174, 2010. </mixed-citation>
</ref>
<ref id="ref90">
<label>90</label><mixed-citation publication-type="other" xlink:type="simple"> Twomey,~S.: Pollution and the planetary albedo, Atmos. Environ., 8, 1251–1256, 1974. </mixed-citation>
</ref>
<ref id="ref91">
<label>91</label><mixed-citation publication-type="other" xlink:type="simple"> Twomey,~S.: Aerosols, clouds and radiation, Atmos. Environ. A, 25, 2435–2442, 1991. %</mixed-citation>
</ref>
<ref id="ref92">
<label>92</label><mixed-citation publication-type="other" xlink:type="simple"> Vellore,~R., Koracin,~D., and Wetzel,~M.: A~method of improving cloud predictions for % real-time forecasting and visualization. Advances in Visual Computing, edited by: % Bebis,~G. et~al.\blackbox\bfPlease add all editors., Springer, \blackbox\bfPlease provide %  place of publishing., 544–553, 2006. </mixed-citation>
</ref>
<ref id="ref93">
<label>93</label><mixed-citation publication-type="other" xlink:type="simple"> Vellore,~R., Koracin,~D., and Wetzel,~M.: A~method of improving cloud predictions for real-time forecasting and visualization. Advances in Visual Computing, edited by: Bebis, G., Boyle, R., Parvin, B., Koracin, D., Remagnino, P., Nefian, A., Meenakshisundaram, G., Pascucci, V., Zara, J., Molineros, J., Theisel, H. and Malzbender, T., Springer, Berlin, Germany, 544–553, 2006. </mixed-citation>
</ref>
<ref id="ref94">
<label>94</label><mixed-citation publication-type="other" xlink:type="simple"> Vellore,~R., Koracin,~D., Wetzel,~M., Chai,~S., and Wang,~Q.: Challenges in Mesoscale prediction of a~nocturnal stratocumulus-topped marine boundary layer and implications for operational forecasting, Weather Forecast., 22, 1101–1122, 2007. </mixed-citation>
</ref>
<ref id="ref95">
<label>95</label><mixed-citation publication-type="other" xlink:type="simple"> Wang,~H. and Feingold,~G.: Modeling mesoscale cellular structures and drizzle in marine stratocumulus. Part I: Impact of drizzle on the formation and evolution of open cells,~J. Atmos. Sci., 66, 3257–3275, 2009a. </mixed-citation>
</ref>
<ref id="ref96">
<label>96</label><mixed-citation publication-type="other" xlink:type="simple"> Wang,~H., Feingold,~G.: Modeling mesoscale cellular structures and drizzle in marine stratocumulus. Part II: The microphysics and dynamics of the boundary region between open and closed cells J. Atmos. Sci., 66, 3257–3275, http://dx.doi.org/10.1175/2009JAS3120.1doi:10.1175/2009JAS3120.1, 2009b. </mixed-citation>
</ref>
<ref id="ref97">
<label>97</label><mixed-citation publication-type="other" xlink:type="simple"> % Wang,~H., Feingold,~G., Wood,~R., and Kazil,~J.: Modelling microphysical and meteorological controls on precipitation and cloud cellular structures in Southeast Pacific stratocumulus, Atmos. Chem. Phys., 10, 6347–6362, http://dx.doi.org/10.5194/acp-10–6347-2010doi:10.5194/acp-10–6347-2010, 2010. % ### SELF-REFERENCE ### Wang,~H., Feingold,~G., Wood,~R., and Kazil,~J.: Modelling microphysical and meteorological controls on precipitation and cloud cellular structures in Southeast Pacific stratocumulus, Atmos. Chem. Phys., 10, 6347–6362, http://dx.doi.org/10.5194/acp-10-6347-2010doi:10.5194/acp-10-6347-2010, 2010. </mixed-citation>
</ref>
<ref id="ref98">
<label>98</label><mixed-citation publication-type="other" xlink:type="simple"> % Wang,~S., O&apos;Neill,~L W., Jiang,~Q., de Szoeke,~S P., Hong,~X., Jin,~H., Thompson,~W T., and Zheng,~X.: A~regional real-time forecast of marine boundary layers during VOCALS-REx, Atmos. Chem. Phys., 11, 421–437, http://dx.doi.org/10.5194/acp-11–421-2011doi:10.5194/acp-11–421-2011, 2011. % ### SELF-REFERENCE ### Wang,~S., O&apos;Neill,~L W., Jiang,~Q., de~Szoeke,~S P., Hong,~X., Jin,~H., Thompson,~W T., and Zheng,~X.: A regional real-time forecast of marine boundary layers during VOCALS-REx, Atmos. Chem. Phys., 11, 421–437, http://dx.doi.org/10.5194/acp-11-421-2011doi:10.5194/acp-11-421-2011, 2011. </mixed-citation>
</ref>
<ref id="ref99">
<label>99</label><mixed-citation publication-type="other" xlink:type="simple"> Wexler,~A S., Lurmann,~F W., and Seinfeld,~J H.: Modelling urban and regional aerosols – I. Model development, Atmos. Environ., 28, 531–546, 1994. </mixed-citation>
</ref>
<ref id="ref100">
<label>100</label><mixed-citation publication-type="other" xlink:type="simple"> % Wood,~R., Mechoso,~C R., Bretherton,~C S., Weller,~R A., Huebert,~B., Straneo,~F., Albrecht,~B A., Coe,~H., Allen,~G., Vaughan,~G., Daum,~P., Fairall,~C., Chand,~D., Gallardo Klenner,~L., Garreaud,~R., Grados,~C., Covert,~D S., Bates,~T S., Krejci,~R., Russell,~L M., de Szoeke,~S., Brewer,~A., Yuter,~S E., Springston,~S R., Chaigneau,~A., Toniazzo,~T., Minnis,~P., Palikonda,~R., Abel,~S J., Brown,~W O J., Williams,~S., Fochesatto,~J., Brioude,~J., and Bower,~K N.: The VAMOS Ocean-Cloud-Atmosphere-Land Study Regional Experiment (VOCALS-REx): goals, platforms, and field operations, Atmos. Chem. Phys., 11, 627–654, http://dx.doi.org/10.5194/acp-11–627-2011doi:10.5194/acp-11–627-2011, 2011. % ### SELF-REFERENCE ### Wood,~R., Mechoso,~C R., Bretherton,~C S., Weller,~R A., Huebert,~B., Straneo,~F., Albrecht,~B A., Coe,~H., Allen,~G., Vaughan,~G., Daum,~P., Fairall,~C., Chand,~D., Gallardo~Klenner,~L., Garreaud,~R., Grados,~C., Covert,~D S., Bates,~T S., Krejci,~R., Russell,~L M., de~Szoeke,~S., Brewer,~A., Yuter,~S E., Springston,~S R., Chaigneau,~A., Toniazzo,~T., Minnis,~P., Palikonda,~R., Abel,~S J., Brown,~W O J., Williams,~S., Fochesatto,~J., Brioude,~J., and Bower,~K N.: The VAMOS Ocean-Cloud-Atmosphere-Land Study Regional Experiment (VOCALS-REx): goals, platforms, and field operations, Atmos. Chem. Phys., 11, 627–654, http://dx.doi.org/10.5194/acp-11-627-2011doi:10.5194/acp-11-627-2011, 2011. </mixed-citation>
</ref>
<ref id="ref101">
<label>101</label><mixed-citation publication-type="other" xlink:type="simple"> % Wyant,~M C., Wood,~R., Bretherton,~C S., Mechoso,~C R., Bacmeister,~J., Balmaseda,~M A., Barrett,~B., Codron,~F., Earnshaw,~P., Fast,~J., Hannay,~C., Kaiser,~J W., Kitagawa,~H., Klein,~S A., Köhler,~M., Manganello,~J., Pan,~H.-~L., Sun,~F., Wang,~S., and Wang,~Y.: The PreVOCA experiment: modeling the lower troposphere in the Southeast Pacific, Atmos. Chem. Phys., 10, 4757–4774, http://dx.doi.org/10.5194/acp-10–4757-2010doi:10.5194/acp-10–4757-2010, 2010. % ### SELF-REFERENCE ### Wyant,~M C., Wood,~R., Bretherton,~C S., Mechoso,~C R., Bacmeister,~J., Balmaseda,~M A., Barrett,~B., Codron,~F., Earnshaw,~P., Fast,~J., Hannay,~C., Kaiser,~J W., Kitagawa,~H., Klein,~S A., Köhler,~M., Manganello,~J., Pan,~H.-L., Sun,~F., Wang,~S., and Wang,~Y.: The PreVOCA experiment: modeling the lower troposphere in the Southeast Pacific, Atmos. Chem. Phys., 10, 4757–4774, http://dx.doi.org/10.5194/acp-10-4757-2010doi:10.5194/acp-10-4757-2010, 2010. </mixed-citation>
</ref>
<ref id="ref102">
<label>102</label><mixed-citation publication-type="other" xlink:type="simple"> % Yang,~M., Blomquist,~B W., and Huebert,~B J.: Constraining the concentration of the hydroxyl radical in a~stratocumulus-topped marine boundary layer from sea-to-air eddy covariance flux measurements of dimethylsulfide, Atmos. Chem. Phys., 9, 9225–9236, http://dx.doi.org/10.5194/acp-9–9225-2009doi:10.5194/acp-9–9225-2009, 2009. % ### SELF-REFERENCE ### Yang,~M., Blomquist,~B W., and Huebert,~B J.: Constraining the concentration of the hydroxyl radical in a stratocumulus-topped marine boundary layer from sea-to-air eddy covariance flux measurements of dimethylsulfide, Atmos. Chem. Phys., 9, 9225–9236, http://dx.doi.org/10.5194/acp-9-9225-2009doi:10.5194/acp-9-9225-2009, 2009. </mixed-citation>
</ref>
<ref id="ref103">
<label>103</label><mixed-citation publication-type="other" xlink:type="simple"> % Yang,~M., Huebert,~B J., Blomquist,~B W., Howell,~S G., Shank,~L M., McNaughton,~C S., Clarke,~A D., Hawkins,~L N., Russell,~L M., Covert,~D S., Coffman,~D J., Bates,~T S., Quinn,~P K., Zagorac,~N., Bandy,~A R., de Szoeke,~S P., Zuidema,~P D., Tucker,~S C., Brewer,~W A., Benedict,~K B., and Collett,~J L.: Atmospheric sulfur cycling in the Southeastern Pacific – longitudinal distribution, vertical profile, and diel variability observed during VOCALS-REx, Atmos. Chem. Phys., 11, 5079–5097, http://dx.doi.org/10.5194/acp-11–5079-2011doi:10.5194/acp-11–5079-2011, 2011. % ### SELF-REFERENCE ### Yang,~M., Huebert,~B J., Blomquist,~B W., Howell,~S G., Shank,~L M., McNaughton,~C S., Clarke,~A D., Hawkins,~L N., Russell,~L M., Covert,~D S., Coffman,~D J., Bates,~T S., Quinn,~P K., Zagorac,~N., Bandy,~A R., de~Szoeke,~S P., Zuidema,~P D., Tucker,~S C., Brewer,~W A., Benedict,~K B., and Collett,~J L.: Atmospheric sulfur cycling in the southeastern Pacific â longitudinal distribution, vertical profile, and diel variability observed during VOCALS-REx, Atmos. Chem. Phys., 11, 5079–5097, http://dx.doi.org/10.5194/acp-11-5079-2011doi:10.5194/acp-11-5079-2011, 2011. </mixed-citation>
</ref>
<ref id="ref104">
<label>104</label><mixed-citation publication-type="other" xlink:type="simple"> % Yang,~Q.,~W I. Gustafson Jr., Fast,~J D., Wang,~H., Easter,~R C., and Morrison,~H.: Assessing regional scale predictions of aerosols, marine stratocumulus, and their interactions during VOCALS-REx using WRF-Chem, Atmos. Chem. Phys. Discuss., 11, 22663–22718, http://dx.doi.org/10.5194/acpd-11–22663–2011doi:10.5194/acpd-11–22663–2011, 2011. % ### SELF-REFERENCE ### Yang,~Q., Gustafson~Jr.,~W I., Fast,~J D., Wang,~H., Easter,~R C., and Morrison,~H.: Assessing regional scale predictions of aerosols, marine stratocumulus, and their interactions during VOCALS-REx using WRF-Chem, Atmos. Chem. Phys. Discuss., 11, 22663–22718, http://dx.doi.org/10.5194/acpd-11-22663-2011doi:10.5194/acpd-11-22663-2011, 2011. </mixed-citation>
</ref>
<ref id="ref105">
<label>105</label><mixed-citation publication-type="other" xlink:type="simple"> Zaveri,~R A. and Peters,~L K.: A~new lumped structure photochemical mechanism for large-scale applications,~J. Geophys. Res., 104, 30387–30415, 1999. </mixed-citation>
</ref>
<ref id="ref106">
<label>106</label><mixed-citation publication-type="other" xlink:type="simple"> Zaveri,~R A., Easter,~R C., Fast,~J D., and Peters,~L K.: Model for simulating aerosol interactions and chemistry (MOSAIC),~J. Geophys. Res., 113, D13204, http://dx.doi.org/10.1029/2007JD008782doi:10.1029/2007JD008782, 2008. </mixed-citation>
</ref>
<ref id="ref107">
<label>107</label><mixed-citation publication-type="other" xlink:type="simple"> Zhu,~P., Albrecht,~B A., Ghate,~V P., and Zhu,~Z.: Multiple-scale simulations of stratocumulus clouds,~J. Geophys. Res., 115, D23201, http://dx.doi.org/10.1029/2010JD014400doi:10.1029/2010JD014400, 2010. </mixed-citation>
</ref>
</ref-list>
</back>
</article>